Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDC42EP1Q00587 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 RPL13P2-201ENST00000440687 659 ntBASIC17.52■□□□□ 0.4
CDC42EP1Q00587 KRT17P7-201ENST00000451704 1104 ntBASIC17.52■□□□□ 0.4
CDC42EP1Q00587 AC104596.2-201ENST00000512793 793 ntBASIC17.52■□□□□ 0.4
CDC42EP1Q00587 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 TMEM261P1-201ENST00000604899 340 ntBASIC17.52■□□□□ 0.4
CDC42EP1Q00587 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.52■□□□□ 0.4
CDC42EP1Q00587 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC42EP1Q00587 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDC42EP1Q00587 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDC42EP1Q00587 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.52■□□□□ 0.39
CDC42EP1Q00587 AC092171.3-201ENST00000610122 2651 ntBASIC17.52■□□□□ 0.39
CDC42EP1Q00587 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CDC42EP1Q00587 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
CDC42EP1Q00587 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDC42EP1Q00587 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.52■□□□□ 0.39
CDC42EP1Q00587 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 DGCR5-201ENST00000399539 862 ntBASIC17.51■□□□□ 0.39
CDC42EP1Q00587 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 TOMM22P5-201ENST00000416399 439 ntBASIC17.51■□□□□ 0.39
CDC42EP1Q00587 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 MYCLP2-201ENST00000449268 967 ntBASIC17.51■□□□□ 0.39
CDC42EP1Q00587 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 AC004790.1-201ENST00000612686 536 ntBASIC17.51■□□□□ 0.39
CDC42EP1Q00587 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 REXO1L1P-202ENST00000608646 1974 ntBASIC17.51■□□□□ 0.39
CDC42EP1Q00587 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42EP1Q00587 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms