Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH13P55290 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDH13P55290 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH13P55290 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH13P55290 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 AC025580.3-201ENST00000617932 1424 ntBASIC15.86■□□□□ 0.13
CDH13P55290 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH13P55290 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH13P55290 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH13P55290 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 AL078644.1-201ENST00000609881 752 ntBASIC15.86■□□□□ 0.13
CDH13P55290 AC007064.4-201ENST00000637740 555 ntBASIC15.86■□□□□ 0.13
CDH13P55290 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 HLA-A-201ENST00000376802 1334 ntBASIC15.86■□□□□ 0.13
CDH13P55290 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 AC092850.2-201ENST00000623821 2697 ntBASIC15.86■□□□□ 0.13
CDH13P55290 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.86■□□□□ 0.13
CDH13P55290 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH13P55290 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH13P55290 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH13P55290 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH13P55290 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 AC073439.1-201ENST00000624121 1774 ntBASIC15.85■□□□□ 0.13
CDH13P55290 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH13P55290 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH13P55290 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH13P55290 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH13P55290 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 AC068418.2-201ENST00000577309 3703 ntBASIC15.85■□□□□ 0.13
CDH13P55290 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CDH13P55290 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH13P55290 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH13P55290 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH13P55290 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH13P55290 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH13P55290 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH13P55290 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH13P55290 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH13P55290 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
CDH13P55290 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH13P55290 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
CDH13P55290 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH13P55290 AC004877.2-201ENST00000623941 599 ntBASIC15.85■□□□□ 0.13
CDH13P55290 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDH13P55290 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH13P55290 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms