Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AC005498.2-205ENST00000593218 784 ntBASIC17.64■□□□□ 0.41
NCKAP1LP55160 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.64■□□□□ 0.41
NCKAP1LP55160 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.64■□□□□ 0.41
NCKAP1LP55160 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NCKAP1LP55160 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NCKAP1LP55160 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCKAP1LP55160 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCKAP1LP55160 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKAP1LP55160 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 REXO1L1P-202ENST00000608646 1974 ntBASIC17.63■□□□□ 0.41
NCKAP1LP55160 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 AC010491.1-201ENST00000563101 2797 ntBASIC17.63■□□□□ 0.41
NCKAP1LP55160 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 AC100757.3-201ENST00000622361 1406 ntBASIC17.63■□□□□ 0.41
NCKAP1LP55160 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKAP1LP55160 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKAP1LP55160 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 FO393414.2-201ENST00000405153 598 ntBASIC17.62■□□□□ 0.41
NCKAP1LP55160 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 TSSK5P-201ENST00000423978 907 ntBASIC17.62■□□□□ 0.41
NCKAP1LP55160 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NCKAP1LP55160 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKAP1LP55160 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NCKAP1LP55160 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 AL365203.3-201ENST00000609742 2057 ntBASIC17.61■□□□□ 0.41
NCKAP1LP55160 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCKAP1LP55160 AZGP1P1-201ENST00000411909 902 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms