Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCPP55072 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCPP55072 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCPP55072 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCPP55072 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.34■□□□□ 0.37
VCPP55072 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VCPP55072 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VCPP55072 AC079776.1-201ENST00000401540 1152 ntBASIC17.34■□□□□ 0.37
VCPP55072 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VCPP55072 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
VCPP55072 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.34■□□□□ 0.37
VCPP55072 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VCPP55072 ACA64.2-201ENST00000459014 129 ntBASIC17.34■□□□□ 0.37
VCPP55072 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VCPP55072 AC092658.1-201ENST00000505836 891 ntBASIC17.34■□□□□ 0.37
VCPP55072 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VCPP55072 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.34■□□□□ 0.37
VCPP55072 ALG1L8P-201ENST00000533887 760 ntBASIC17.34■□□□□ 0.37
VCPP55072 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 MIR4492-201ENST00000581627 80 ntBASIC17.34■□□□□ 0.37
VCPP55072 MIR4453-201ENST00000584019 89 ntBASIC17.34■□□□□ 0.37
VCPP55072 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCPP55072 AL009183.1-201ENST00000603760 355 ntBASIC17.34■□□□□ 0.37
VCPP55072 CICP6-201ENST00000457191 2729 ntBASIC17.34■□□□□ 0.37
VCPP55072 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
VCPP55072 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCPP55072 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.33■□□□□ 0.37
VCPP55072 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.33■□□□□ 0.37
VCPP55072 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.33■□□□□ 0.37
VCPP55072 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCPP55072 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.33■□□□□ 0.37
VCPP55072 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
VCPP55072 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
VCPP55072 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.33■□□□□ 0.37
VCPP55072 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VCPP55072 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.33■□□□□ 0.36
VCPP55072 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.33■□□□□ 0.36
VCPP55072 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.33■□□□□ 0.36
VCPP55072 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.33■□□□□ 0.36
VCPP55072 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.33■□□□□ 0.36
VCPP55072 HCG4-201ENST00000418983 998 ntBASIC17.33■□□□□ 0.36
VCPP55072 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.33■□□□□ 0.36
VCPP55072 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.33■□□□□ 0.36
VCPP55072 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VCPP55072 AC073592.8-201ENST00000624126 511 ntBASIC17.33■□□□□ 0.36
VCPP55072 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 AL671710.1-201ENST00000610245 2349 ntBASIC17.33■□□□□ 0.36
VCPP55072 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.33■□□□□ 0.36
VCPP55072 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 AC008741.2-201ENST00000612792 3115 ntBASIC17.33■□□□□ 0.36
VCPP55072 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.33■□□□□ 0.36
VCPP55072 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCPP55072 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.33■□□□□ 0.36
VCPP55072 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VCPP55072 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
VCPP55072 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VCPP55072 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.32■□□□□ 0.36
VCPP55072 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
VCPP55072 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VCPP55072 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 RNU1-129P-201ENST00000384064 167 ntBASIC17.32■□□□□ 0.36
VCPP55072 MIR658-201ENST00000385210 100 ntBASIC17.32■□□□□ 0.36
VCPP55072 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.32■□□□□ 0.36
VCPP55072 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VCPP55072 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.32■□□□□ 0.36
VCPP55072 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.32■□□□□ 0.36
VCPP55072 U1.21-201ENST00000580816 167 ntBASIC17.32■□□□□ 0.36
VCPP55072 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCPP55072 AL031055.1-201ENST00000606362 631 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms