Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
APOC4P55056 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 RPL37AP1-201ENST00000412502 279 ntBASIC11.84□□□□□ -0.51
APOC4P55056 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC4P55056 AL080243.2-201ENST00000418783 582 ntBASIC11.84□□□□□ -0.51
APOC4P55056 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.84□□□□□ -0.51
APOC4P55056 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC4P55056 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC4P55056 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 AC243562.2-201ENST00000561247 970 ntBASIC11.84□□□□□ -0.51
APOC4P55056 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC4P55056 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC4P55056 AL133215.2-201ENST00000609242 977 ntBASIC11.84□□□□□ -0.51
APOC4P55056 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
APOC4P55056 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 AL592424.1-201ENST00000563624 1536 ntBASIC11.84□□□□□ -0.51
APOC4P55056 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
APOC4P55056 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC4P55056 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
APOC4P55056 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC4P55056 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
APOC4P55056 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
APOC4P55056 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
APOC4P55056 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
APOC4P55056 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
APOC4P55056 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
APOC4P55056 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 BTBD7P1-201ENST00000447253 1453 ntBASIC11.83□□□□□ -0.52
APOC4P55056 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC4P55056 AC012313.1-201ENST00000593393 3059 ntBASIC11.83□□□□□ -0.52
APOC4P55056 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 KRT8P12-202ENST00000472924 1397 ntBASIC11.83□□□□□ -0.52
APOC4P55056 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.83□□□□□ -0.52
APOC4P55056 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
APOC4P55056 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.83□□□□□ -0.52
APOC4P55056 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC4P55056 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 AC236430.1-201ENST00000402231 743 ntBASIC11.83□□□□□ -0.52
APOC4P55056 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC4P55056 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
APOC4P55056 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.83□□□□□ -0.52
APOC4P55056 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.83□□□□□ -0.52
APOC4P55056 AC002472.2-201ENST00000442739 958 ntBASIC11.83□□□□□ -0.52
APOC4P55056 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC4P55056 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC4P55056 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 BANF1P1-201ENST00000553684 263 ntBASIC11.83□□□□□ -0.52
APOC4P55056 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.83□□□□□ -0.52
APOC4P55056 AC138761.1-201ENST00000584393 385 ntBASIC11.83□□□□□ -0.52
APOC4P55056 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.83□□□□□ -0.52
APOC4P55056 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
APOC4P55056 AC008761.3-201ENST00000624803 892 ntBASIC11.83□□□□□ -0.52
APOC4P55056 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC4P55056 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC4P55056 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
APOC4P55056 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms