Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.88■□□□□ 0.45
LBX1P52954 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.88■□□□□ 0.45
LBX1P52954 RNMTL1P1-201ENST00000454103 560 ntBASIC17.88■□□□□ 0.45
LBX1P52954 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC17.88■□□□□ 0.45
LBX1P52954 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.88■□□□□ 0.45
LBX1P52954 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.88■□□□□ 0.45
LBX1P52954 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
LBX1P52954 RN7SL48P-201ENST00000579283 293 ntBASIC17.88■□□□□ 0.45
LBX1P52954 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.88■□□□□ 0.45
LBX1P52954 AC242376.2-201ENST00000619355 883 ntBASIC17.88■□□□□ 0.45
LBX1P52954 AC051619.9-201ENST00000623237 597 ntBASIC17.88■□□□□ 0.45
LBX1P52954 AL132780.4-201ENST00000624870 1135 ntBASIC17.88■□□□□ 0.45
LBX1P52954 AC233280.19-201ENST00000633223 136 ntBASIC17.88■□□□□ 0.45
LBX1P52954 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.88■□□□□ 0.45
LBX1P52954 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LBX1P52954 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.88■□□□□ 0.45
LBX1P52954 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LBX1P52954 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LBX1P52954 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.88■□□□□ 0.45
LBX1P52954 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LBX1P52954 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LBX1P52954 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.88■□□□□ 0.45
LBX1P52954 AL121723.1-201ENST00000445194 1519 ntBASIC17.88■□□□□ 0.45
LBX1P52954 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LBX1P52954 AC007787.1-201ENST00000588095 1583 ntBASIC17.87■□□□□ 0.45
LBX1P52954 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.87■□□□□ 0.45
LBX1P52954 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.87■□□□□ 0.45
LBX1P52954 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.87■□□□□ 0.45
LBX1P52954 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LBX1P52954 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.87■□□□□ 0.45
LBX1P52954 AL133267.1-201ENST00000398220 340 ntBASIC17.87■□□□□ 0.45
LBX1P52954 AC104073.2-201ENST00000453737 312 ntBASIC17.87■□□□□ 0.45
LBX1P52954 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.87■□□□□ 0.45
LBX1P52954 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.87■□□□□ 0.45
LBX1P52954 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.87■□□□□ 0.45
LBX1P52954 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.87■□□□□ 0.45
LBX1P52954 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.87■□□□□ 0.45
LBX1P52954 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LBX1P52954 AP001002.3-201ENST00000623482 206 ntBASIC17.87■□□□□ 0.45
LBX1P52954 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LBX1P52954 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LBX1P52954 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.87■□□□□ 0.45
LBX1P52954 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.87■□□□□ 0.45
LBX1P52954 TBC1D3J-201ENST00000620719 1426 ntBASIC17.87■□□□□ 0.45
LBX1P52954 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.87■□□□□ 0.45
LBX1P52954 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
LBX1P52954 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LBX1P52954 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
LBX1P52954 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LBX1P52954 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.86■□□□□ 0.45
LBX1P52954 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 AC012317.2-201ENST00000623305 2251 ntBASIC17.86■□□□□ 0.45
LBX1P52954 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.86■□□□□ 0.45
LBX1P52954 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LBX1P52954 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.86■□□□□ 0.45
LBX1P52954 AL354877.1-201ENST00000424412 413 ntBASIC17.86■□□□□ 0.45
LBX1P52954 DDX39AP1-201ENST00000445147 1181 ntBASIC17.86■□□□□ 0.45
LBX1P52954 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.86■□□□□ 0.45
LBX1P52954 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.86■□□□□ 0.45
LBX1P52954 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.86■□□□□ 0.45
LBX1P52954 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LBX1P52954 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.86■□□□□ 0.45
LBX1P52954 AC004923.1-202ENST00000642106 209 ntBASIC17.86■□□□□ 0.45
LBX1P52954 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LBX1P52954 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.86■□□□□ 0.45
LBX1P52954 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.86■□□□□ 0.45
LBX1P52954 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.86■□□□□ 0.45
LBX1P52954 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.86■□□□□ 0.45
LBX1P52954 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LBX1P52954 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.86■□□□□ 0.45
LBX1P52954 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LBX1P52954 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.86■□□□□ 0.45
LBX1P52954 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LBX1P52954 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.85■□□□□ 0.45
LBX1P52954 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LBX1P52954 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.85■□□□□ 0.45
LBX1P52954 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LBX1P52954 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms