Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
USP11P51784 AL391005.1-201ENST00000623953 2435 ntBASIC18.21■□□□□ 0.51
USP11P51784 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
USP11P51784 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.21■□□□□ 0.51
USP11P51784 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.21■□□□□ 0.51
USP11P51784 SERBP1P3-201ENST00000459980 809 ntBASIC18.21■□□□□ 0.51
USP11P51784 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.21■□□□□ 0.51
USP11P51784 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.21■□□□□ 0.51
USP11P51784 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.21■□□□□ 0.51
USP11P51784 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 AL033527.5-202ENST00000641632 1098 ntBASIC18.21■□□□□ 0.51
USP11P51784 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
USP11P51784 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.21■□□□□ 0.51
USP11P51784 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP11P51784 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
USP11P51784 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.21■□□□□ 0.5
USP11P51784 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
USP11P51784 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
USP11P51784 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.21■□□□□ 0.5
USP11P51784 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.2■□□□□ 0.5
USP11P51784 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 LINC02447-202ENST00000501888 2146 ntBASIC18.2■□□□□ 0.5
USP11P51784 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.2■□□□□ 0.5
USP11P51784 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.2■□□□□ 0.5
USP11P51784 AC026691.1-201ENST00000602502 2017 ntBASIC18.2■□□□□ 0.5
USP11P51784 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.2■□□□□ 0.5
USP11P51784 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.2■□□□□ 0.5
USP11P51784 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
USP11P51784 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
USP11P51784 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.2■□□□□ 0.5
USP11P51784 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.2■□□□□ 0.5
USP11P51784 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.2■□□□□ 0.5
USP11P51784 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.2■□□□□ 0.5
USP11P51784 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.2■□□□□ 0.5
USP11P51784 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.2■□□□□ 0.5
USP11P51784 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.2■□□□□ 0.5
USP11P51784 AL390754.1-201ENST00000619088 582 ntBASIC18.2■□□□□ 0.5
USP11P51784 MIR6069-201ENST00000620069 79 ntBASIC18.2■□□□□ 0.5
USP11P51784 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
USP11P51784 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP11P51784 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.2■□□□□ 0.5
USP11P51784 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.2■□□□□ 0.5
USP11P51784 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
USP11P51784 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
USP11P51784 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USP11P51784 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
USP11P51784 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.19■□□□□ 0.5
USP11P51784 AC112504.1-201ENST00000623415 1841 ntBASIC18.19■□□□□ 0.5
USP11P51784 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
USP11P51784 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.19■□□□□ 0.5
USP11P51784 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
USP11P51784 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.19■□□□□ 0.5
USP11P51784 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP11P51784 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.19■□□□□ 0.5
USP11P51784 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.19■□□□□ 0.5
USP11P51784 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.19■□□□□ 0.5
USP11P51784 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.19■□□□□ 0.5
USP11P51784 AC004890.2-204ENST00000481968 304 ntBASIC18.19■□□□□ 0.5
USP11P51784 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.19■□□□□ 0.5
USP11P51784 AC093214.1-201ENST00000511688 1107 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms