Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-1P43699 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-1P43699 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-1P43699 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-1P43699 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-1P43699 BNIP3P18-201ENST00000593976 575 ntBASIC13.32□□□□□ -0.28
NKX2-1P43699 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 AL121672.3-201ENST00000608644 468 ntBASIC13.32□□□□□ -0.28
NKX2-1P43699 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX2-1P43699 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX2-1P43699 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX2-1P43699 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-1P43699 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-1P43699 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-1P43699 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-1P43699 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX2-1P43699 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.32□□□□□ -0.28
NKX2-1P43699 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX2-1P43699 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-1P43699 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NKX2-1P43699 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX2-1P43699 AC067750.1-201ENST00000608826 6545 ntBASIC13.31□□□□□ -0.28
NKX2-1P43699 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-1P43699 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-1P43699 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-1P43699 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-1P43699 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-1P43699 AC005622.1-201ENST00000636801 1703 ntBASIC13.31□□□□□ -0.28
NKX2-1P43699 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-1P43699 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.31□□□□□ -0.28
NKX2-1P43699 ABCD1P5-201ENST00000445663 754 ntBASIC13.31□□□□□ -0.28
NKX2-1P43699 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-1P43699 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-1P43699 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-1P43699 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-1P43699 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 AC114341.1-201ENST00000618070 349 ntBASIC13.31□□□□□ -0.28
NKX2-1P43699 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-1P43699 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NKX2-1P43699 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-1P43699 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
NKX2-1P43699 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-1P43699 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NKX2-1P43699 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NKX2-1P43699 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NKX2-1P43699 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NKX2-1P43699 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NKX2-1P43699 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX2-1P43699 AL031133.1-201ENST00000406807 723 ntBASIC13.3□□□□□ -0.28
NKX2-1P43699 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX2-1P43699 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
NKX2-1P43699 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
NKX2-1P43699 REXO1L3P-201ENST00000622202 1288 ntBASIC13.3□□□□□ -0.28
NKX2-1P43699 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX2-1P43699 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX2-1P43699 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-1P43699 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms