Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2CP42773 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2CP42773 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 FAAHP1-202ENST00000446499 1238 ntBASIC15.32■□□□□ 0.04
CDKN2CP42773 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN2CP42773 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.32■□□□□ 0.04
CDKN2CP42773 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN2CP42773 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2CP42773 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2CP42773 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2CP42773 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN2CP42773 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDKN2CP42773 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 AC020658.6-201ENST00000623564 1870 ntBASIC15.31■□□□□ 0.04
CDKN2CP42773 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDKN2CP42773 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN2CP42773 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN2CP42773 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDKN2CP42773 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN2CP42773 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 AL450487.1-201ENST00000426799 995 ntBASIC15.31■□□□□ 0.04
CDKN2CP42773 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN2CP42773 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN2CP42773 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN2CP42773 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN2CP42773 AP001005.1-201ENST00000571755 1248 ntBASIC15.31■□□□□ 0.04
CDKN2CP42773 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 AC023141.13-201ENST00000604991 943 ntBASIC15.31■□□□□ 0.04
CDKN2CP42773 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 AL589702.1-201ENST00000641229 1509 ntBASIC15.31■□□□□ 0.04
CDKN2CP42773 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2CP42773 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDKN2CP42773 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms