Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.71■□□□□ 0.59
ATP2B1P20020 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
ATP2B1P20020 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ATP2B1P20020 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 HTR5BP-201ENST00000430851 1154 ntBASIC18.7■□□□□ 0.58
ATP2B1P20020 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.7■□□□□ 0.58
ATP2B1P20020 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 PRYP6-201ENST00000514804 343 ntBASIC18.7■□□□□ 0.58
ATP2B1P20020 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATP2B1P20020 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
ATP2B1P20020 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2B1P20020 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
ATP2B1P20020 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.7■□□□□ 0.58
ATP2B1P20020 C20orf181-201ENST00000623918 480 ntBASIC18.7■□□□□ 0.58
ATP2B1P20020 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.7■□□□□ 0.58
ATP2B1P20020 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.7■□□□□ 0.58
ATP2B1P20020 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATP2B1P20020 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATP2B1P20020 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATP2B1P20020 AL592424.1-201ENST00000563624 1536 ntBASIC18.69■□□□□ 0.58
ATP2B1P20020 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP2B1P20020 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2B1P20020 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2B1P20020 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP2B1P20020 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP2B1P20020 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.69■□□□□ 0.58
ATP2B1P20020 TIMM8BP1-201ENST00000452384 211 ntBASIC18.69■□□□□ 0.58
ATP2B1P20020 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2B1P20020 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.69■□□□□ 0.58
ATP2B1P20020 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.69■□□□□ 0.58
ATP2B1P20020 AC010327.4-202ENST00000591484 748 ntBASIC18.69■□□□□ 0.58
ATP2B1P20020 AC023511.2-201ENST00000618803 211 ntBASIC18.69■□□□□ 0.58
ATP2B1P20020 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATP2B1P20020 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2B1P20020 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2B1P20020 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.69■□□□□ 0.58
ATP2B1P20020 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2B1P20020 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.68■□□□□ 0.58
ATP2B1P20020 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2B1P20020 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATP2B1P20020 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2B1P20020 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2B1P20020 KRT8P48-201ENST00000515599 1220 ntBASIC18.68■□□□□ 0.58
ATP2B1P20020 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2B1P20020 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2B1P20020 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2B1P20020 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATP2B1P20020 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2B1P20020 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ATP2B1P20020 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms