Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
NFKB1P19838 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.47■□□□□ 0.23
NFKB1P19838 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.47■□□□□ 0.23
NFKB1P19838 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.47■□□□□ 0.23
NFKB1P19838 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.47■□□□□ 0.23
NFKB1P19838 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.47■□□□□ 0.23
NFKB1P19838 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.47■□□□□ 0.23
NFKB1P19838 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 YBX1P5-201ENST00000509441 847 ntBASIC16.47■□□□□ 0.23
NFKB1P19838 RNA5SP410-201ENST00000516285 106 ntBASIC16.47■□□□□ 0.23
NFKB1P19838 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.47■□□□□ 0.23
NFKB1P19838 KRT8P23-201ENST00000560090 1207 ntBASIC16.47■□□□□ 0.23
NFKB1P19838 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 AC022145.2-201ENST00000598203 171 ntBASIC16.47■□□□□ 0.23
NFKB1P19838 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.47■□□□□ 0.23
NFKB1P19838 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NFKB1P19838 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.47■□□□□ 0.23
NFKB1P19838 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NFKB1P19838 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
NFKB1P19838 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
NFKB1P19838 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.47■□□□□ 0.23
NFKB1P19838 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NFKB1P19838 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 AP005117.1-202ENST00000581724 1908 ntBASIC16.47■□□□□ 0.23
NFKB1P19838 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NFKB1P19838 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.46■□□□□ 0.23
NFKB1P19838 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.46■□□□□ 0.23
NFKB1P19838 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NFKB1P19838 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.46■□□□□ 0.23
NFKB1P19838 AC046158.3-201ENST00000624947 2558 ntBASIC16.46■□□□□ 0.23
NFKB1P19838 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.46■□□□□ 0.23
NFKB1P19838 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NFKB1P19838 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.46■□□□□ 0.23
NFKB1P19838 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.46■□□□□ 0.23
NFKB1P19838 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NFKB1P19838 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
NFKB1P19838 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.46■□□□□ 0.23
NFKB1P19838 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 AC112482.1-201ENST00000492080 688 ntBASIC16.46■□□□□ 0.23
NFKB1P19838 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.46■□□□□ 0.23
NFKB1P19838 SLC25A39P2-201ENST00000537614 270 ntBASIC16.46■□□□□ 0.23
NFKB1P19838 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 AC024267.1-201ENST00000582320 895 ntBASIC16.46■□□□□ 0.23
NFKB1P19838 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.46■□□□□ 0.23
NFKB1P19838 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.46■□□□□ 0.23
NFKB1P19838 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NFKB1P19838 AC079416.2-201ENST00000625035 1193 ntBASIC16.46■□□□□ 0.23
NFKB1P19838 AC105339.1-204ENST00000636249 355 ntBASIC16.46■□□□□ 0.23
NFKB1P19838 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.46■□□□□ 0.23
NFKB1P19838 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NFKB1P19838 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NFKB1P19838 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.46■□□□□ 0.23
NFKB1P19838 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
NFKB1P19838 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NFKB1P19838 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NFKB1P19838 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms