Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.24□□□□□ -0.29
DEFA4P12838 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.24□□□□□ -0.29
DEFA4P12838 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
DEFA4P12838 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.24□□□□□ -0.29
DEFA4P12838 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.24□□□□□ -0.29
DEFA4P12838 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.24□□□□□ -0.29
DEFA4P12838 AL356488.2-201ENST00000602755 427 ntBASIC13.24□□□□□ -0.29
DEFA4P12838 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.24□□□□□ -0.29
DEFA4P12838 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.24□□□□□ -0.29
DEFA4P12838 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
DEFA4P12838 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
DEFA4P12838 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
DEFA4P12838 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DEFA4P12838 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 AL353732.1-201ENST00000569618 1459 ntBASIC13.23□□□□□ -0.29
DEFA4P12838 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 AC013268.4-201ENST00000637413 2228 ntBASIC13.23□□□□□ -0.29
DEFA4P12838 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.23□□□□□ -0.29
DEFA4P12838 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.23□□□□□ -0.29
DEFA4P12838 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.23□□□□□ -0.29
DEFA4P12838 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.23□□□□□ -0.29
DEFA4P12838 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.23□□□□□ -0.29
DEFA4P12838 KRT18P67-201ENST00000432816 1264 ntBASIC13.23□□□□□ -0.29
DEFA4P12838 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.23□□□□□ -0.29
DEFA4P12838 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.23□□□□□ -0.29
DEFA4P12838 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.23□□□□□ -0.29
DEFA4P12838 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.23□□□□□ -0.29
DEFA4P12838 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.23□□□□□ -0.29
DEFA4P12838 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.23□□□□□ -0.29
DEFA4P12838 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.23□□□□□ -0.29
DEFA4P12838 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DEFA4P12838 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.23□□□□□ -0.29
DEFA4P12838 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms