Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RARBP10826 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.03■□□□□ 0.48
RARBP10826 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RARBP10826 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RARBP10826 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RARBP10826 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RARBP10826 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RARBP10826 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.03■□□□□ 0.48
RARBP10826 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 AC245100.3-201ENST00000441281 285 ntBASIC18.03■□□□□ 0.48
RARBP10826 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 SLC25A47P1-201ENST00000531577 414 ntBASIC18.03■□□□□ 0.48
RARBP10826 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.03■□□□□ 0.48
RARBP10826 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.03■□□□□ 0.48
RARBP10826 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 MIR4538-201ENST00000581377 78 ntBASIC18.03■□□□□ 0.48
RARBP10826 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.03■□□□□ 0.48
RARBP10826 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.03■□□□□ 0.48
RARBP10826 AC133539.2-201ENST00000604757 467 ntBASIC18.03■□□□□ 0.48
RARBP10826 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARBP10826 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 KRT8P22-201ENST00000562317 1415 ntBASIC18.03■□□□□ 0.48
RARBP10826 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RARBP10826 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
RARBP10826 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARBP10826 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARBP10826 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RARBP10826 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RARBP10826 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.03■□□□□ 0.48
RARBP10826 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RARBP10826 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.02■□□□□ 0.48
RARBP10826 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RARBP10826 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RARBP10826 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.02■□□□□ 0.48
RARBP10826 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.02■□□□□ 0.48
RARBP10826 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
RARBP10826 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.02■□□□□ 0.48
RARBP10826 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 AL442647.2-201ENST00000429864 857 ntBASIC18.02■□□□□ 0.48
RARBP10826 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RARBP10826 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 ACTBP11-201ENST00000436287 1126 ntBASIC18.02■□□□□ 0.48
RARBP10826 KLF2P4-201ENST00000451959 1225 ntBASIC18.02■□□□□ 0.48
RARBP10826 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.02■□□□□ 0.48
RARBP10826 CTBP2P5-201ENST00000454986 1264 ntBASIC18.02■□□□□ 0.48
RARBP10826 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.02■□□□□ 0.48
RARBP10826 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RARBP10826 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.02■□□□□ 0.48
RARBP10826 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RARBP10826 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.02■□□□□ 0.48
RARBP10826 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RARBP10826 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RARBP10826 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.02■□□□□ 0.48
RARBP10826 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.02■□□□□ 0.48
RARBP10826 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.02■□□□□ 0.48
RARBP10826 RPSAP52-203ENST00000622976 1023 ntBASIC18.02■□□□□ 0.48
RARBP10826 CU634019.7-201ENST00000624153 1185 ntBASIC18.02■□□□□ 0.48
RARBP10826 FP236241.2-201ENST00000624906 1185 ntBASIC18.02■□□□□ 0.48
RARBP10826 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.02■□□□□ 0.48
RARBP10826 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.47
RARBP10826 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RARBP10826 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RARBP10826 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.02■□□□□ 0.47
RARBP10826 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RARBP10826 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RARBP10826 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RARBP10826 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARBP10826 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARBP10826 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.01■□□□□ 0.47
RARBP10826 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARBP10826 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
RARBP10826 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.01■□□□□ 0.47
RARBP10826 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.01■□□□□ 0.47
RARBP10826 LINC01144-201ENST00000626198 1710 ntBASIC18.01■□□□□ 0.47
RARBP10826 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.01■□□□□ 0.47
RARBP10826 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARBP10826 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RARBP10826 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RARBP10826 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RARBP10826 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.01■□□□□ 0.47
RARBP10826 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.01■□□□□ 0.47
RARBP10826 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms