Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CAPN1P07384 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16■□□□□ 0.15
CAPN1P07384 NMU-203ENST00000507338 658 ntTSL 3 BASIC16■□□□□ 0.15
CAPN1P07384 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16■□□□□ 0.15
CAPN1P07384 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16■□□□□ 0.15
CAPN1P07384 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16■□□□□ 0.15
CAPN1P07384 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CAPN1P07384 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CAPN1P07384 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN1P07384 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CAPN1P07384 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CAPN1P07384 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN1P07384 AC092850.2-201ENST00000623821 2697 ntBASIC15.99■□□□□ 0.15
CAPN1P07384 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CAPN1P07384 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN1P07384 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN1P07384 AC004461.1-201ENST00000412461 403 ntBASIC15.99■□□□□ 0.15
CAPN1P07384 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN1P07384 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.99■□□□□ 0.15
CAPN1P07384 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.99■□□□□ 0.15
CAPN1P07384 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN1P07384 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.99■□□□□ 0.15
CAPN1P07384 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN1P07384 RFPL4AP1-201ENST00000530883 850 ntBASIC15.99■□□□□ 0.15
CAPN1P07384 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.99■□□□□ 0.15
CAPN1P07384 MIR4515-201ENST00000584082 81 ntBASIC15.99■□□□□ 0.15
CAPN1P07384 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.99■□□□□ 0.15
CAPN1P07384 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN1P07384 AL645728.2-201ENST00000641974 660 ntBASIC15.99■□□□□ 0.15
CAPN1P07384 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CAPN1P07384 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.99■□□□□ 0.15
CAPN1P07384 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN1P07384 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CAPN1P07384 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CAPN1P07384 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN1P07384 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN1P07384 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 AC105917.1-201ENST00000506637 2539 ntBASIC15.98■□□□□ 0.15
CAPN1P07384 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CAPN1P07384 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 AL139400.1-201ENST00000366220 510 ntBASIC15.98■□□□□ 0.15
CAPN1P07384 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.98■□□□□ 0.15
CAPN1P07384 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CAPN1P07384 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPN1P07384 AC140658.5-201ENST00000438532 169 ntBASIC15.98■□□□□ 0.15
CAPN1P07384 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 AC112191.1-201ENST00000523689 701 ntBASIC15.98■□□□□ 0.15
CAPN1P07384 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CAPN1P07384 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPN1P07384 AC022145.2-201ENST00000598203 171 ntBASIC15.98■□□□□ 0.15
CAPN1P07384 AC099522.2-201ENST00000607001 744 ntBASIC15.98■□□□□ 0.15
CAPN1P07384 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms