Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SNX4O95219 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
SNX4O95219 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
SNX4O95219 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.29■□□□□ 0.04
SNX4O95219 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SNX4O95219 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.29■□□□□ 0.04
SNX4O95219 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SNX4O95219 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 AC092474.2-201ENST00000424288 719 ntBASIC15.29■□□□□ 0.04
SNX4O95219 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.29■□□□□ 0.04
SNX4O95219 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 AP006288.1-201ENST00000446065 395 ntBASIC15.29■□□□□ 0.04
SNX4O95219 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.29■□□□□ 0.04
SNX4O95219 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SNX4O95219 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.29■□□□□ 0.04
SNX4O95219 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.29■□□□□ 0.04
SNX4O95219 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.29■□□□□ 0.04
SNX4O95219 AL031055.1-201ENST00000606362 631 ntBASIC15.29■□□□□ 0.04
SNX4O95219 AC021097.1-201ENST00000607902 574 ntBASIC15.29■□□□□ 0.04
SNX4O95219 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SNX4O95219 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.29■□□□□ 0.04
SNX4O95219 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.29■□□□□ 0.04
SNX4O95219 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SNX4O95219 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 MTHFR-217ENST00000641820 1569 ntBASIC15.28■□□□□ 0.04
SNX4O95219 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SNX4O95219 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 AC254562.1-201ENST00000417586 456 ntBASIC15.28■□□□□ 0.04
SNX4O95219 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNX4O95219 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.28■□□□□ 0.04
SNX4O95219 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.28■□□□□ 0.04
SNX4O95219 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.28■□□□□ 0.04
SNX4O95219 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.28■□□□□ 0.04
SNX4O95219 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.28■□□□□ 0.04
SNX4O95219 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.28■□□□□ 0.04
SNX4O95219 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SNX4O95219 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SNX4O95219 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNX4O95219 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.28■□□□□ 0.04
SNX4O95219 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.28■□□□□ 0.04
SNX4O95219 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SNX4O95219 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.28■□□□□ 0.04
SNX4O95219 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SNX4O95219 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SNX4O95219 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 AC022532.1-201ENST00000624563 1728 ntBASIC15.27■□□□□ 0.04
SNX4O95219 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
SNX4O95219 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SNX4O95219 AL671277.1-201ENST00000429656 993 ntBASIC15.27■□□□□ 0.04
SNX4O95219 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.27■□□□□ 0.04
SNX4O95219 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.27■□□□□ 0.04
SNX4O95219 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNX4O95219 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.27■□□□□ 0.04
SNX4O95219 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.27■□□□□ 0.04
SNX4O95219 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.27■□□□□ 0.04
SNX4O95219 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.27■□□□□ 0.04
SNX4O95219 SNHG9-202ENST00000564014 471 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms