Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIOO75962 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIOO75962 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIOO75962 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIOO75962 AC015818.8-201ENST00000587907 1519 ntBASIC16.15■□□□□ 0.18
TRIOO75962 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIOO75962 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRIOO75962 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIOO75962 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIOO75962 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIOO75962 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIOO75962 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIOO75962 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIOO75962 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIOO75962 AC078819.1-201ENST00000547454 765 ntBASIC16.15■□□□□ 0.18
TRIOO75962 AC012085.1-201ENST00000548270 765 ntBASIC16.15■□□□□ 0.18
TRIOO75962 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIOO75962 AP003419.4-201ENST00000616071 517 ntBASIC16.15■□□□□ 0.18
TRIOO75962 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIOO75962 AC091812.3-201ENST00000621362 345 ntBASIC16.15■□□□□ 0.18
TRIOO75962 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIOO75962 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIOO75962 AC005332.8-201ENST00000622750 2735 ntBASIC16.14■□□□□ 0.18
TRIOO75962 LINC02012-201ENST00000608206 1725 ntBASIC16.14■□□□□ 0.18
TRIOO75962 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.14■□□□□ 0.18
TRIOO75962 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIOO75962 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRIOO75962 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIOO75962 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 AC145423.3-201ENST00000615987 467 ntBASIC16.14■□□□□ 0.17
TRIOO75962 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIOO75962 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIOO75962 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 CYP46A4P-201ENST00000414953 267 ntBASIC16.14■□□□□ 0.17
TRIOO75962 RPL13AP19-201ENST00000434320 584 ntBASIC16.14■□□□□ 0.17
TRIOO75962 EEF1DP6-201ENST00000449232 372 ntBASIC16.14■□□□□ 0.17
TRIOO75962 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIOO75962 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIOO75962 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIOO75962 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.14■□□□□ 0.17
TRIOO75962 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRIOO75962 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIOO75962 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIOO75962 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIOO75962 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIOO75962 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIOO75962 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIOO75962 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIOO75962 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 POM121L10P-201ENST00000436994 1285 ntBASIC16.13■□□□□ 0.17
TRIOO75962 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.13■□□□□ 0.17
TRIOO75962 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRIOO75962 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIOO75962 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 TUBB8P12-201ENST00000308911 1335 ntBASIC16.13■□□□□ 0.17
TRIOO75962 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 TUBB7P-202ENST00000428444 1305 ntBASIC16.13■□□□□ 0.17
TRIOO75962 TUBB8P7-204ENST00000567960 1332 ntBASIC16.13■□□□□ 0.17
TRIOO75962 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIOO75962 AC005622.1-201ENST00000636801 1703 ntBASIC16.13■□□□□ 0.17
TRIOO75962 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIOO75962 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIOO75962 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIOO75962 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIOO75962 AL133499.1-201ENST00000596207 608 ntBASIC16.13■□□□□ 0.17
TRIOO75962 HLA-C-210ENST00000640219 976 ntBASIC16.13■□□□□ 0.17
TRIOO75962 AL662844.4-201ENST00000606367 2838 ntBASIC16.13■□□□□ 0.17
TRIOO75962 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms