Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.97■□□□□ 0.31
OPHN1O60890 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
OPHN1O60890 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.97■□□□□ 0.31
OPHN1O60890 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
OPHN1O60890 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.97■□□□□ 0.31
OPHN1O60890 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
OPHN1O60890 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.97■□□□□ 0.31
OPHN1O60890 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.97■□□□□ 0.31
OPHN1O60890 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
OPHN1O60890 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
OPHN1O60890 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.97■□□□□ 0.31
OPHN1O60890 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.97■□□□□ 0.31
OPHN1O60890 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
OPHN1O60890 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
OPHN1O60890 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.96■□□□□ 0.31
OPHN1O60890 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
OPHN1O60890 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 AC132872.4-202ENST00000622924 2756 ntBASIC16.96■□□□□ 0.31
OPHN1O60890 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
OPHN1O60890 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
OPHN1O60890 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.96■□□□□ 0.31
OPHN1O60890 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.96■□□□□ 0.31
OPHN1O60890 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.96■□□□□ 0.31
OPHN1O60890 AC093214.1-201ENST00000511688 1107 ntBASIC16.96■□□□□ 0.31
OPHN1O60890 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.96■□□□□ 0.31
OPHN1O60890 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.31
OPHN1O60890 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.96■□□□□ 0.31
OPHN1O60890 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.96■□□□□ 0.31
OPHN1O60890 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.96■□□□□ 0.31
OPHN1O60890 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
OPHN1O60890 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
OPHN1O60890 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
OPHN1O60890 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
OPHN1O60890 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.3
OPHN1O60890 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
OPHN1O60890 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
OPHN1O60890 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.96■□□□□ 0.3
OPHN1O60890 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
OPHN1O60890 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.95■□□□□ 0.3
OPHN1O60890 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
OPHN1O60890 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms