Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 BANF1P1-201ENST00000553684 263 ntBASIC15.48■□□□□ 0.07
LCMT2O60294 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.48■□□□□ 0.07
LCMT2O60294 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 AC093028.1-201ENST00000622998 982 ntBASIC15.48■□□□□ 0.07
LCMT2O60294 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LCMT2O60294 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 CDC14C-201ENST00000428251 1719 ntBASIC15.48■□□□□ 0.07
LCMT2O60294 AL136982.4-201ENST00000437689 1740 ntBASIC15.48■□□□□ 0.07
LCMT2O60294 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 AC008741.2-201ENST00000612792 3115 ntBASIC15.48■□□□□ 0.07
LCMT2O60294 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCMT2O60294 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.47■□□□□ 0.07
LCMT2O60294 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LCMT2O60294 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 MST1L-201ENST00000442552 2185 ntBASIC15.47■□□□□ 0.07
LCMT2O60294 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.47■□□□□ 0.07
LCMT2O60294 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.47■□□□□ 0.07
LCMT2O60294 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.47■□□□□ 0.07
LCMT2O60294 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LCMT2O60294 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.47■□□□□ 0.07
LCMT2O60294 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.47■□□□□ 0.07
LCMT2O60294 MIR6080-201ENST00000617359 66 ntBASIC15.47■□□□□ 0.07
LCMT2O60294 Z92544.3-201ENST00000624747 417 ntBASIC15.47■□□□□ 0.07
LCMT2O60294 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.47■□□□□ 0.07
LCMT2O60294 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.47■□□□□ 0.07
LCMT2O60294 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCMT2O60294 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.47■□□□□ 0.07
LCMT2O60294 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.46■□□□□ 0.07
LCMT2O60294 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
LCMT2O60294 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
LCMT2O60294 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.46■□□□□ 0.07
LCMT2O60294 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 AC069224.1-201ENST00000566372 1715 ntBASIC15.46■□□□□ 0.07
LCMT2O60294 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 LINC02447-202ENST00000501888 2146 ntBASIC15.46■□□□□ 0.07
LCMT2O60294 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.46■□□□□ 0.07
LCMT2O60294 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 AL691432.1-201ENST00000596308 1422 ntBASIC15.46■□□□□ 0.07
LCMT2O60294 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LCMT2O60294 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LCMT2O60294 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.46■□□□□ 0.07
LCMT2O60294 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.46■□□□□ 0.07
LCMT2O60294 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.46■□□□□ 0.07
LCMT2O60294 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.46■□□□□ 0.07
LCMT2O60294 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.46■□□□□ 0.07
LCMT2O60294 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.46■□□□□ 0.07
LCMT2O60294 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.46■□□□□ 0.07
LCMT2O60294 AC025678.2-201ENST00000562061 970 ntBASIC15.46■□□□□ 0.07
LCMT2O60294 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.46■□□□□ 0.07
LCMT2O60294 AC105021.1-202ENST00000570572 669 ntBASIC15.46■□□□□ 0.07
LCMT2O60294 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.46■□□□□ 0.07
LCMT2O60294 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.46■□□□□ 0.07
LCMT2O60294 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.46■□□□□ 0.07
LCMT2O60294 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.46■□□□□ 0.07
LCMT2O60294 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms