Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.16■□□□□ 0.18
LDB2O43679 AL136982.4-201ENST00000437689 1740 ntBASIC16.16■□□□□ 0.18
LDB2O43679 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LDB2O43679 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LDB2O43679 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
LDB2O43679 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
LDB2O43679 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.16■□□□□ 0.18
LDB2O43679 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB2O43679 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LDB2O43679 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LDB2O43679 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 AC254562.1-201ENST00000417586 456 ntBASIC16.15■□□□□ 0.18
LDB2O43679 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB2O43679 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.15■□□□□ 0.18
LDB2O43679 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB2O43679 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB2O43679 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
LDB2O43679 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 AL596442.2-201ENST00000610240 980 ntBASIC16.15■□□□□ 0.18
LDB2O43679 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB2O43679 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 AC009093.7-201ENST00000623853 1223 ntBASIC16.15■□□□□ 0.18
LDB2O43679 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.15■□□□□ 0.18
LDB2O43679 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LDB2O43679 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LDB2O43679 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB2O43679 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.14■□□□□ 0.18
LDB2O43679 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LDB2O43679 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LDB2O43679 BNIP3P1-202ENST00000550043 1585 ntBASIC16.14■□□□□ 0.17
LDB2O43679 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LDB2O43679 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
LDB2O43679 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LDB2O43679 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.14■□□□□ 0.17
LDB2O43679 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LDB2O43679 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
LDB2O43679 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LDB2O43679 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.14■□□□□ 0.17
LDB2O43679 DNAJB3-202ENST00000449667 1266 ntBASIC16.14■□□□□ 0.17
LDB2O43679 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.14■□□□□ 0.17
LDB2O43679 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.14■□□□□ 0.17
LDB2O43679 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LDB2O43679 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.14■□□□□ 0.17
LDB2O43679 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.14■□□□□ 0.17
LDB2O43679 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.14■□□□□ 0.17
LDB2O43679 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.14■□□□□ 0.17
LDB2O43679 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
LDB2O43679 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.14■□□□□ 0.17
LDB2O43679 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.14■□□□□ 0.17
LDB2O43679 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.14■□□□□ 0.17
LDB2O43679 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB2O43679 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LDB2O43679 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LDB2O43679 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB2O43679 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB2O43679 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms