Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MSI1O43347 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 AL513477.1-201ENST00000602865 2407 ntBASIC16.78■□□□□ 0.28
MSI1O43347 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MSI1O43347 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.78■□□□□ 0.28
MSI1O43347 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
MSI1O43347 CYP4F24P-201ENST00000586049 1580 ntBASIC16.78■□□□□ 0.28
MSI1O43347 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.78■□□□□ 0.28
MSI1O43347 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.78■□□□□ 0.28
MSI1O43347 BASP1P1-201ENST00000430708 665 ntBASIC16.78■□□□□ 0.28
MSI1O43347 BCRP1-201ENST00000444246 691 ntBASIC16.78■□□□□ 0.28
MSI1O43347 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.78■□□□□ 0.28
MSI1O43347 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.78■□□□□ 0.28
MSI1O43347 SPCS2P1-201ENST00000561636 679 ntBASIC16.78■□□□□ 0.28
MSI1O43347 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MSI1O43347 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.78■□□□□ 0.28
MSI1O43347 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.78■□□□□ 0.28
MSI1O43347 AC011467.4-201ENST00000594891 528 ntBASIC16.78■□□□□ 0.28
MSI1O43347 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.78■□□□□ 0.28
MSI1O43347 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.78■□□□□ 0.28
MSI1O43347 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MSI1O43347 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MSI1O43347 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.77■□□□□ 0.28
MSI1O43347 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.77■□□□□ 0.28
MSI1O43347 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 AC245100.5-201ENST00000452108 331 ntBASIC16.77■□□□□ 0.28
MSI1O43347 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.77■□□□□ 0.28
MSI1O43347 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.77■□□□□ 0.28
MSI1O43347 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.77■□□□□ 0.28
MSI1O43347 AL590560.3-201ENST00000623350 461 ntBASIC16.77■□□□□ 0.28
MSI1O43347 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.77■□□□□ 0.28
MSI1O43347 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.77■□□□□ 0.28
MSI1O43347 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MSI1O43347 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MSI1O43347 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MSI1O43347 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
MSI1O43347 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.77■□□□□ 0.27
MSI1O43347 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MSI1O43347 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
MSI1O43347 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MSI1O43347 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
MSI1O43347 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MSI1O43347 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
MSI1O43347 MTHFR-217ENST00000641820 1569 ntBASIC16.77■□□□□ 0.27
MSI1O43347 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MSI1O43347 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.76■□□□□ 0.27
MSI1O43347 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.76■□□□□ 0.27
MSI1O43347 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
MSI1O43347 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.76■□□□□ 0.27
MSI1O43347 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MSI1O43347 TSSK5P-201ENST00000423978 907 ntBASIC16.76■□□□□ 0.27
MSI1O43347 AC241585.1-201ENST00000433527 519 ntBASIC16.76■□□□□ 0.27
MSI1O43347 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.76■□□□□ 0.27
MSI1O43347 UGT1A2P-201ENST00000454886 866 ntBASIC16.76■□□□□ 0.27
MSI1O43347 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.76■□□□□ 0.27
MSI1O43347 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms