Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 IER3-202ENST00000376377 1350 ntBASIC13.89□□□□□ -0.19
TMEM235A6NFC5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 HCG4-201ENST00000418983 998 ntBASIC13.89□□□□□ -0.19
TMEM235A6NFC5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 KRT16P4-201ENST00000453883 522 ntBASIC13.89□□□□□ -0.19
TMEM235A6NFC5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.89□□□□□ -0.19
TMEM235A6NFC5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM235A6NFC5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 ARMC10P1-201ENST00000313754 855 ntBASIC13.88□□□□□ -0.19
TMEM235A6NFC5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.88□□□□□ -0.19
TMEM235A6NFC5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 AL805961.1-202ENST00000641562 540 ntBASIC13.88□□□□□ -0.19
TMEM235A6NFC5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 U82695.1-201ENST00000635752 1889 ntBASIC13.88□□□□□ -0.19
TMEM235A6NFC5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 PCDHA3-202ENST00000532566 4594 ntBASIC13.88□□□□□ -0.19
TMEM235A6NFC5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM235A6NFC5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 AL009178.2-201ENST00000597278 2719 ntBASIC13.87□□□□□ -0.19
TMEM235A6NFC5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 AC087481.3-201ENST00000602886 1894 ntBASIC13.87□□□□□ -0.19
TMEM235A6NFC5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TMEM235A6NFC5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms