Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AL513523.2-202ENST00000427283 2040 ntBASIC16.3■□□□□ 0.2
PKP3Q9Y446 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.3■□□□□ 0.2
PKP3Q9Y446 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 KRT18P32-201ENST00000424695 1287 ntBASIC16.3■□□□□ 0.2
PKP3Q9Y446 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AP006288.1-201ENST00000446065 395 ntBASIC16.3■□□□□ 0.2
PKP3Q9Y446 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 SNHG9-202ENST00000564014 471 ntBASIC16.3■□□□□ 0.2
PKP3Q9Y446 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AC079781.4-201ENST00000641908 219 ntBASIC16.3■□□□□ 0.2
PKP3Q9Y446 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AL162727.3-201ENST00000635661 2787 ntBASIC16.3■□□□□ 0.2
PKP3Q9Y446 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 HLA-H-201ENST00000383620 1096 ntBASIC16.29■□□□□ 0.2
PKP3Q9Y446 AL627223.1-201ENST00000416693 442 ntBASIC16.29■□□□□ 0.2
PKP3Q9Y446 RNA5SP410-201ENST00000516285 106 ntBASIC16.29■□□□□ 0.2
PKP3Q9Y446 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 SLC25A39P2-201ENST00000537614 270 ntBASIC16.29■□□□□ 0.2
PKP3Q9Y446 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 AC084121.4-201ENST00000641598 221 ntBASIC16.29■□□□□ 0.2
PKP3Q9Y446 AF228730.8-201ENST00000642140 221 ntBASIC16.29■□□□□ 0.2
PKP3Q9Y446 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 FOXO1B-201ENST00000504678 1527 ntBASIC16.29■□□□□ 0.2
PKP3Q9Y446 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP3Q9Y446 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.29■□□□□ 0.2
PKP3Q9Y446 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.28■□□□□ 0.2
PKP3Q9Y446 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PKP3Q9Y446 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.28■□□□□ 0.2
PKP3Q9Y446 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.28■□□□□ 0.2
PKP3Q9Y446 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.28■□□□□ 0.2
PKP3Q9Y446 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP3Q9Y446 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PKP3Q9Y446 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms