Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 AL121578.1-201ENST00000428051 892 ntBASIC19.29■□□□□ 0.68
RTN4Q9NQC3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 APOBEC3D-201ENST00000216099 2528 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 AC126335.2-201ENST00000623362 4637 ntBASIC19.29■□□□□ 0.68
RTN4Q9NQC3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN4Q9NQC3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 SPDYE15P-201ENST00000424157 909 ntBASIC19.28■□□□□ 0.68
RTN4Q9NQC3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 AL441883.1-201ENST00000566170 1045 ntBASIC19.28■□□□□ 0.68
RTN4Q9NQC3 AC140113.3-201ENST00000605663 199 ntBASIC19.28■□□□□ 0.68
RTN4Q9NQC3 AL139327.4-201ENST00000612362 153 ntBASIC19.28■□□□□ 0.68
RTN4Q9NQC3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4Q9NQC3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 AC145285.6-201ENST00000604632 637 ntBASIC19.27■□□□□ 0.68
RTN4Q9NQC3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 AC123912.3-201ENST00000600907 1367 ntBASIC19.27■□□□□ 0.68
RTN4Q9NQC3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC19.27■□□□□ 0.68
RTN4Q9NQC3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
RTN4Q9NQC3 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTN4Q9NQC3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTN4Q9NQC3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTN4Q9NQC3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTN4Q9NQC3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.27■□□□□ 0.67
RTN4Q9NQC3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RTN4Q9NQC3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4Q9NQC3 AC063923.1-201ENST00000478982 1619 ntBASIC19.26■□□□□ 0.67
RTN4Q9NQC3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms