Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.34■□□□□ 0.05
MKKSQ9NPJ1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MKKSQ9NPJ1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 AC105021.1-202ENST00000570572 669 ntBASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 AL390955.2-201ENST00000603032 514 ntBASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 AC073592.8-201ENST00000624126 511 ntBASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 DOC2GP-204ENST00000639052 2548 ntBASIC15.33■□□□□ 0.04
MKKSQ9NPJ1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 HLA-V-204ENST00000476601 1289 ntBASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 AC097493.3-201ENST00000509725 367 ntBASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 SPCS2P1-201ENST00000561636 679 ntBASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 RN7SL828P-201ENST00000607615 303 ntBASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MKKSQ9NPJ1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms