Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.05■□□□□ 0.64
RNF41Q9H4P4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 TREML5P-201ENST00000421694 576 ntBASIC19.05■□□□□ 0.64
RNF41Q9H4P4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF41Q9H4P4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 AC055876.3-201ENST00000431496 288 ntBASIC19.04■□□□□ 0.64
RNF41Q9H4P4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 AC097493.3-201ENST00000509725 367 ntBASIC19.04■□□□□ 0.64
RNF41Q9H4P4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 AC138649.4-201ENST00000612222 287 ntBASIC19.04■□□□□ 0.64
RNF41Q9H4P4 AL138828.2-201ENST00000615812 383 ntBASIC19.04■□□□□ 0.64
RNF41Q9H4P4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 KRT8P12-202ENST00000472924 1397 ntBASIC19.04■□□□□ 0.64
RNF41Q9H4P4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF41Q9H4P4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 AC027369.6-201ENST00000525520 931 ntBASIC19.03■□□□□ 0.64
RNF41Q9H4P4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.03■□□□□ 0.64
RNF41Q9H4P4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF41Q9H4P4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms