Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 NKAPP1-205ENST00000585790 367 ntBASIC16.33■□□□□ 0.2
TRIM4Q9C037 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 AL096865.1-201ENST00000606796 927 ntBASIC16.33■□□□□ 0.2
TRIM4Q9C037 AC093512.1-201ENST00000617969 520 ntBASIC16.33■□□□□ 0.2
TRIM4Q9C037 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 AL139288.1-201ENST00000623748 933 ntBASIC16.33■□□□□ 0.2
TRIM4Q9C037 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 AC138035.3-201ENST00000622706 2791 ntBASIC16.33■□□□□ 0.2
TRIM4Q9C037 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM4Q9C037 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM4Q9C037 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 AC027612.4-201ENST00000605371 583 ntBASIC16.32■□□□□ 0.2
TRIM4Q9C037 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM4Q9C037 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM4Q9C037 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 AL135999.2-201ENST00000622438 1686 ntBASIC16.31■□□□□ 0.2
TRIM4Q9C037 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 AC009336.1-201ENST00000608941 1553 ntBASIC16.31■□□□□ 0.2
TRIM4Q9C037 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 CEND1P1-201ENST00000451006 455 ntBASIC16.31■□□□□ 0.2
TRIM4Q9C037 AC108751.1-201ENST00000490852 363 ntBASIC16.31■□□□□ 0.2
TRIM4Q9C037 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 AC092865.6-201ENST00000642101 219 ntBASIC16.31■□□□□ 0.2
TRIM4Q9C037 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 SNX18-202ENST00000343017 3140 ntBASIC16.31■□□□□ 0.2
TRIM4Q9C037 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM4Q9C037 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM4Q9C037 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms