Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 BCYRN1-201ENST00000418539 200 ntBASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AC012441.1-201ENST00000446669 685 ntBASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AL355864.2-201ENST00000447420 863 ntBASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 FTH1P14-201ENST00000482930 551 ntBASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.43■□□□□ 0.7
RTFDC1Q9BY42 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 AC022211.2-201ENST00000585075 2527 ntBASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 AL049840.4-201ENST00000602422 811 ntBASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTFDC1Q9BY42 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 C1QBPP1-201ENST00000400117 770 ntBASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 SLED1-202ENST00000512051 380 ntBASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.41■□□□□ 0.7
RTFDC1Q9BY42 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms