Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AL391256.1-201ENST00000443260 1855 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 MIR346-201ENST00000362234 95 ntBASIC11.35□□□□□ -0.59
UPK3BQ9BT76 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 CNN2P2-201ENST00000443536 909 ntBASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 CNN2P3-201ENST00000450201 906 ntBASIC11.35□□□□□ -0.59
UPK3BQ9BT76 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AP000842.3-202ENST00000569238 1080 ntBASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AC027307.2-201ENST00000591252 911 ntBASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AL136317.3-201ENST00000618497 906 ntBASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 BANP-227ENST00000626016 2144 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 AC099063.4-201ENST00000641099 1602 ntBASIC11.35□□□□□ -0.59
UPK3BQ9BT76 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
UPK3BQ9BT76 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 SBF1P1-201ENST00000444527 5631 ntBASIC11.34□□□□□ -0.59
UPK3BQ9BT76 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AL139400.1-201ENST00000366220 510 ntBASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 SPDYE7P-202ENST00000420373 878 ntBASIC11.34□□□□□ -0.59
UPK3BQ9BT76 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 CYMP-203ENST00000474680 1263 ntBASIC11.34□□□□□ -0.59
UPK3BQ9BT76 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
UPK3BQ9BT76 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms