Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP1Q96SZ6 AL136982.4-201ENST00000437689 1740 ntBASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 EEF1DP4-201ENST00000446006 880 ntBASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP1Q96SZ6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 TERF1P3-201ENST00000505638 1227 ntBASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 SDHAP3-202ENST00000515467 728 ntBASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 AC010336.2-201ENST00000564226 506 ntBASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
CDK5RAP1Q96SZ6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDK5RAP1Q96SZ6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms