Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SNX27Q96L92 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SNX27Q96L92 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SNX27Q96L92 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SNX27Q96L92 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNX27Q96L92 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SNX27Q96L92 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SNX27Q96L92 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 MIR1909-201ENST00000411312 80 ntBASIC17.4■□□□□ 0.38
SNX27Q96L92 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.4■□□□□ 0.38
SNX27Q96L92 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX27Q96L92 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX27Q96L92 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX27Q96L92 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.4■□□□□ 0.38
SNX27Q96L92 AC044860.1-202ENST00000559481 777 ntBASIC17.4■□□□□ 0.38
SNX27Q96L92 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.4■□□□□ 0.38
SNX27Q96L92 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SNX27Q96L92 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SNX27Q96L92 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX27Q96L92 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
SNX27Q96L92 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNX27Q96L92 CU639417.3-201ENST00000624240 1404 ntBASIC17.39■□□□□ 0.38
SNX27Q96L92 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SNX27Q96L92 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SNX27Q96L92 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX27Q96L92 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.39■□□□□ 0.37
SNX27Q96L92 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX27Q96L92 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX27Q96L92 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNX27Q96L92 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX27Q96L92 AL662799.1-202ENST00000614205 422 ntBASIC17.39■□□□□ 0.37
SNX27Q96L92 MIR6069-201ENST00000620069 79 ntBASIC17.39■□□□□ 0.37
SNX27Q96L92 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.39■□□□□ 0.37
SNX27Q96L92 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX27Q96L92 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX27Q96L92 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SNX27Q96L92 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SNX27Q96L92 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SNX27Q96L92 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SNX27Q96L92 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX27Q96L92 BTBD7P1-201ENST00000447253 1453 ntBASIC17.38■□□□□ 0.37
SNX27Q96L92 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX27Q96L92 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX27Q96L92 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SNX27Q96L92 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX27Q96L92 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX27Q96L92 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX27Q96L92 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX27Q96L92 SPTLC1P1-201ENST00000447199 261 ntBASIC17.38■□□□□ 0.37
SNX27Q96L92 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX27Q96L92 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.38■□□□□ 0.37
SNX27Q96L92 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SNX27Q96L92 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SNX27Q96L92 SPDYE22P-201ENST00000582158 798 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 237.1 ms