Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.82■□□□□ 0.6
CHAMP1Q96JM3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 AC018712.1-201ENST00000455767 687 ntBASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 EMBP1-201ENST00000458200 901 ntBASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 U82695.1-201ENST00000635752 1889 ntBASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 AC018892.3-201ENST00000623986 2499 ntBASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHAMP1Q96JM3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 MIR4515-201ENST00000584082 81 ntBASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 AL031055.1-201ENST00000606362 631 ntBASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHAMP1Q96JM3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 AC090616.6-203ENST00000579186 1945 ntBASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 IGLL3P-201ENST00000412472 434 ntBASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 AC092183.1-201ENST00000469884 875 ntBASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.79■□□□□ 0.6
CHAMP1Q96JM3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms