Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 PCDH8P1-201ENST00000428983 2773 ntBASIC16.64■□□□□ 0.25
CCDC97Q96F63 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC97Q96F63 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC97Q96F63 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 AC092919.2-201ENST00000623631 1645 ntBASIC16.63■□□□□ 0.25
CCDC97Q96F63 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 AL353732.1-201ENST00000569618 1459 ntBASIC16.63■□□□□ 0.25
CCDC97Q96F63 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 AC096734.2-201ENST00000562054 433 ntBASIC16.63■□□□□ 0.25
CCDC97Q96F63 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 CYP2A7P1-201ENST00000595391 815 ntBASIC16.63■□□□□ 0.25
CCDC97Q96F63 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 AC013467.2-201ENST00000605472 835 ntBASIC16.63■□□□□ 0.25
CCDC97Q96F63 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 AC004877.2-201ENST00000623941 599 ntBASIC16.63■□□□□ 0.25
CCDC97Q96F63 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC97Q96F63 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC97Q96F63 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 AL513480.1-201ENST00000451731 511 ntBASIC16.62■□□□□ 0.25
CCDC97Q96F63 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC97Q96F63 AC091167.2-201ENST00000579581 588 ntBASIC16.62■□□□□ 0.25
CCDC97Q96F63 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC97Q96F63 HYMAI-201ENST00000635591 3347 ntBASIC16.62■□□□□ 0.25
CCDC97Q96F63 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms