Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.5■□□□□ 0.39
PGBD4Q96DM1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
PGBD4Q96DM1 UBALD1-205ENST00000590891 2641 ntBASIC17.5■□□□□ 0.39
PGBD4Q96DM1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 CYP4F24P-201ENST00000586049 1580 ntBASIC17.49■□□□□ 0.39
PGBD4Q96DM1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 CU639417.3-201ENST00000624240 1404 ntBASIC17.49■□□□□ 0.39
PGBD4Q96DM1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 MEP1AP4-201ENST00000423244 1087 ntBASIC17.49■□□□□ 0.39
PGBD4Q96DM1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PGBD4Q96DM1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 AL592424.1-201ENST00000563624 1536 ntBASIC17.48■□□□□ 0.39
PGBD4Q96DM1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 AC098614.1-201ENST00000368528 745 ntBASIC17.48■□□□□ 0.39
PGBD4Q96DM1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PGBD4Q96DM1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms