Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6NLQ92738 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6NLQ92738 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
USP6NLQ92738 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
USP6NLQ92738 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.21■□□□□ 0.51
USP6NLQ92738 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6NLQ92738 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.21■□□□□ 0.51
USP6NLQ92738 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6NLQ92738 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP6NLQ92738 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP6NLQ92738 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.21■□□□□ 0.51
USP6NLQ92738 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
USP6NLQ92738 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
USP6NLQ92738 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.2■□□□□ 0.5
USP6NLQ92738 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.2■□□□□ 0.5
USP6NLQ92738 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.2■□□□□ 0.5
USP6NLQ92738 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.2■□□□□ 0.5
USP6NLQ92738 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
USP6NLQ92738 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.2■□□□□ 0.5
USP6NLQ92738 AC004987.2-201ENST00000395959 1148 ntBASIC18.2■□□□□ 0.5
USP6NLQ92738 AZGP1P1-201ENST00000411909 902 ntBASIC18.2■□□□□ 0.5
USP6NLQ92738 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.2■□□□□ 0.5
USP6NLQ92738 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.2■□□□□ 0.5
USP6NLQ92738 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.2■□□□□ 0.5
USP6NLQ92738 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
USP6NLQ92738 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.2■□□□□ 0.5
USP6NLQ92738 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.2■□□□□ 0.5
USP6NLQ92738 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.2■□□□□ 0.5
USP6NLQ92738 TDH-203ENST00000531764 1110 ntBASIC18.2■□□□□ 0.5
USP6NLQ92738 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.2■□□□□ 0.5
USP6NLQ92738 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.2■□□□□ 0.5
USP6NLQ92738 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.2■□□□□ 0.5
USP6NLQ92738 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
USP6NLQ92738 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.2■□□□□ 0.5
USP6NLQ92738 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP6NLQ92738 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.19■□□□□ 0.5
USP6NLQ92738 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
USP6NLQ92738 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USP6NLQ92738 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.19■□□□□ 0.5
USP6NLQ92738 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
USP6NLQ92738 AC005229.1-201ENST00000392885 409 ntBASIC18.19■□□□□ 0.5
USP6NLQ92738 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.19■□□□□ 0.5
USP6NLQ92738 RPL7P3-201ENST00000441388 714 ntBASIC18.19■□□□□ 0.5
USP6NLQ92738 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.19■□□□□ 0.5
USP6NLQ92738 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.19■□□□□ 0.5
USP6NLQ92738 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.19■□□□□ 0.5
USP6NLQ92738 AP000812.2-201ENST00000538934 718 ntBASIC18.19■□□□□ 0.5
USP6NLQ92738 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
USP6NLQ92738 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.19■□□□□ 0.5
USP6NLQ92738 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
USP6NLQ92738 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.19■□□□□ 0.5
USP6NLQ92738 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USP6NLQ92738 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
USP6NLQ92738 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP6NLQ92738 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
USP6NLQ92738 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
USP6NLQ92738 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6NLQ92738 AC020907.1-201ENST00000616460 1350 ntBASIC18.18■□□□□ 0.5
USP6NLQ92738 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP6NLQ92738 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP6NLQ92738 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP6NLQ92738 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
USP6NLQ92738 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.18■□□□□ 0.5
USP6NLQ92738 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms