Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AC023908.3-201ENST00000564211 3047 ntBASIC15.84■□□□□ 0.13
HIPK4Q8NE63 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.83■□□□□ 0.13
HIPK4Q8NE63 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIPK4Q8NE63 AC079776.2-201ENST00000641154 1609 ntBASIC15.83■□□□□ 0.13
HIPK4Q8NE63 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.83■□□□□ 0.13
HIPK4Q8NE63 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIPK4Q8NE63 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
HIPK4Q8NE63 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.83■□□□□ 0.13
HIPK4Q8NE63 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 AC013467.2-201ENST00000605472 835 ntBASIC15.83■□□□□ 0.12
HIPK4Q8NE63 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.83■□□□□ 0.12
HIPK4Q8NE63 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 FAM45BP-202ENST00000592932 1624 ntBASIC15.83■□□□□ 0.12
HIPK4Q8NE63 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIPK4Q8NE63 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 AL031731.1-201ENST00000642131 2094 ntBASIC15.82■□□□□ 0.12
HIPK4Q8NE63 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 AP000867.3-201ENST00000524675 377 ntBASIC15.82■□□□□ 0.12
HIPK4Q8NE63 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 AC012615.1-201ENST00000565797 1299 ntBASIC15.82■□□□□ 0.12
HIPK4Q8NE63 AC087388.1-201ENST00000571370 1112 ntBASIC15.82■□□□□ 0.12
HIPK4Q8NE63 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 AC010331.1-201ENST00000611423 582 ntBASIC15.82■□□□□ 0.12
HIPK4Q8NE63 AL590326.2-201ENST00000625139 305 ntBASIC15.82■□□□□ 0.12
HIPK4Q8NE63 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 CICP24-201ENST00000605464 2705 ntBASIC15.82■□□□□ 0.12
HIPK4Q8NE63 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 AL512652.2-201ENST00000625156 1716 ntBASIC15.82■□□□□ 0.12
HIPK4Q8NE63 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIPK4Q8NE63 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIPK4Q8NE63 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms