Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 PCDHB19P-201ENST00000570871 2371 ntBASIC17.06■□□□□ 0.32
NUP93Q8N1F7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 MIR3197-201ENST00000582241 73 ntBASIC17.06■□□□□ 0.32
NUP93Q8N1F7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 RPL37AP1-201ENST00000412502 279 ntBASIC17.05■□□□□ 0.32
NUP93Q8N1F7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.05■□□□□ 0.32
NUP93Q8N1F7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 AL079307.3-201ENST00000556114 283 ntBASIC17.05■□□□□ 0.32
NUP93Q8N1F7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NUP93Q8N1F7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.04■□□□□ 0.32
NUP93Q8N1F7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 AL139010.1-201ENST00000454878 894 ntBASIC17.04■□□□□ 0.32
NUP93Q8N1F7 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.04■□□□□ 0.32
NUP93Q8N1F7 AC004890.2-204ENST00000481968 304 ntBASIC17.04■□□□□ 0.32
NUP93Q8N1F7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 TEX28P1-201ENST00000613479 1221 ntBASIC17.04■□□□□ 0.32
NUP93Q8N1F7 TEX28P2-201ENST00000617764 1221 ntBASIC17.04■□□□□ 0.32
NUP93Q8N1F7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NUP93Q8N1F7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms