Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 REXO1L1P-202ENST00000608646 1974 ntBASIC13.25□□□□□ -0.29
VPS13CQ709C8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 ALOX12P2-203ENST00000570921 1945 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 AL662890.1-201ENST00000396818 632 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 TOMM22P5-201ENST00000416399 439 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 EEF1DP4-201ENST00000446006 880 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 AL139011.1-202ENST00000642063 584 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 AC006001.1-201ENST00000325130 474 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 AC124947.2-201ENST00000547118 1133 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 AC005252.2-201ENST00000624630 1141 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 LETM1P2-201ENST00000597330 2178 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13CQ709C8 AC134407.2-201ENST00000625089 1978 ntBASIC13.24□□□□□ -0.29
VPS13CQ709C8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13CQ709C8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 AL592424.1-201ENST00000563624 1536 ntBASIC13.23□□□□□ -0.29
VPS13CQ709C8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13CQ709C8 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.23□□□□□ -0.29
VPS13CQ709C8 AP001505.2-201ENST00000616815 443 ntBASIC13.23□□□□□ -0.29
VPS13CQ709C8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS13CQ709C8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms