Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 OR8S1-201ENST00000310194 1080 ntBASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 U91328.1-201ENST00000437528 223 ntBASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 POU5F1P6-201ENST00000466990 990 ntBASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 WASH4P-201ENST00000564273 1246 ntBASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC62Q6P9F0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CCDC62Q6P9F0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC62Q6P9F0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CCDC62Q6P9F0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AC055876.2-201ENST00000531834 546 ntBASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AC099568.2-201ENST00000609194 695 ntBASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 IGHV3-72-202ENST00000621503 303 ntBASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AD000864.1-201ENST00000624076 2295 ntBASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC62Q6P9F0 AL592424.1-201ENST00000563624 1536 ntBASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 KRT17P7-201ENST00000451704 1104 ntBASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 TPRX2P-201ENST00000535362 881 ntBASIC18.13■□□□□ 0.49
CCDC62Q6P9F0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms