Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDH1Q08174 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDH1Q08174 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDH1Q08174 AC024267.1-201ENST00000582320 895 ntBASIC15.65■□□□□ 0.1
PCDH1Q08174 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDH1Q08174 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDH1Q08174 AC026120.1-201ENST00000611536 926 ntBASIC15.65■□□□□ 0.1
PCDH1Q08174 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDH1Q08174 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDH1Q08174 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDH1Q08174 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PCDH1Q08174 AC079328.2-201ENST00000561241 3354 ntBASIC15.65■□□□□ 0.1
PCDH1Q08174 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDH1Q08174 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
PCDH1Q08174 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PCDH1Q08174 AP005117.1-202ENST00000581724 1908 ntBASIC15.64■□□□□ 0.09
PCDH1Q08174 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDH1Q08174 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDH1Q08174 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
PCDH1Q08174 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDH1Q08174 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDH1Q08174 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PCDH1Q08174 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PCDH1Q08174 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDH1Q08174 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDH1Q08174 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.64■□□□□ 0.09
PCDH1Q08174 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDH1Q08174 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDH1Q08174 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDH1Q08174 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDH1Q08174 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDH1Q08174 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PCDH1Q08174 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.63■□□□□ 0.09
PCDH1Q08174 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PCDH1Q08174 SPCS2P4-201ENST00000436160 681 ntBASIC15.63■□□□□ 0.09
PCDH1Q08174 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 POLD2P1-201ENST00000511220 997 ntBASIC15.63■□□□□ 0.09
PCDH1Q08174 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDH1Q08174 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDH1Q08174 AP000842.3-202ENST00000569238 1080 ntBASIC15.63■□□□□ 0.09
PCDH1Q08174 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PCDH1Q08174 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PCDH1Q08174 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDH1Q08174 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PCDH1Q08174 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PCDH1Q08174 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDH1Q08174 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 AC010491.1-201ENST00000563101 2797 ntBASIC15.63■□□□□ 0.09
PCDH1Q08174 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PCDH1Q08174 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms