Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SUMO3P55854 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SUMO3P55854 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 AC112504.1-201ENST00000623415 1841 ntBASIC14.64□□□□□ -0.07
SUMO3P55854 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SUMO3P55854 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.64□□□□□ -0.07
SUMO3P55854 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.64□□□□□ -0.07
SUMO3P55854 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
SUMO3P55854 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.63□□□□□ -0.07
SUMO3P55854 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.63□□□□□ -0.07
SUMO3P55854 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.63□□□□□ -0.07
SUMO3P55854 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.63□□□□□ -0.07
SUMO3P55854 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.63□□□□□ -0.07
SUMO3P55854 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.63□□□□□ -0.07
SUMO3P55854 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.63□□□□□ -0.07
SUMO3P55854 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.63□□□□□ -0.07
SUMO3P55854 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.63□□□□□ -0.07
SUMO3P55854 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SUMO3P55854 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.63□□□□□ -0.07
SUMO3P55854 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SUMO3P55854 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SUMO3P55854 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SUMO3P55854 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.62□□□□□ -0.07
SUMO3P55854 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 AL139400.1-201ENST00000366220 510 ntBASIC14.62□□□□□ -0.07
SUMO3P55854 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SUMO3P55854 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.62□□□□□ -0.07
SUMO3P55854 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.62□□□□□ -0.07
SUMO3P55854 AC109322.1-201ENST00000524499 1264 ntBASIC14.62□□□□□ -0.07
SUMO3P55854 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.62□□□□□ -0.07
SUMO3P55854 BANF1P1-201ENST00000553684 263 ntBASIC14.62□□□□□ -0.07
SUMO3P55854 AC004449.1-201ENST00000564240 433 ntBASIC14.62□□□□□ -0.07
SUMO3P55854 MIR4453-201ENST00000584019 89 ntBASIC14.62□□□□□ -0.07
SUMO3P55854 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.62□□□□□ -0.07
SUMO3P55854 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SUMO3P55854 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms