Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH11P55287 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 YBX2P1-201ENST00000394192 760 ntBASIC14.92□□□□□ -0.02
CDH11P55287 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH11P55287 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH11P55287 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH11P55287 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH11P55287 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH11P55287 AC131009.4-201ENST00000624048 1740 ntBASIC14.92□□□□□ -0.02
CDH11P55287 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH11P55287 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDH11P55287 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH11P55287 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDH11P55287 MST1L-201ENST00000442552 2185 ntBASIC14.91□□□□□ -0.02
CDH11P55287 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH11P55287 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.91□□□□□ -0.02
CDH11P55287 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH11P55287 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
CDH11P55287 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
CDH11P55287 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.91□□□□□ -0.02
CDH11P55287 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH11P55287 UPF3AP3-201ENST00000420996 769 ntBASIC14.91□□□□□ -0.02
CDH11P55287 GPX1P2-201ENST00000429271 606 ntBASIC14.91□□□□□ -0.02
CDH11P55287 VN2R19P-201ENST00000442399 1052 ntBASIC14.91□□□□□ -0.02
CDH11P55287 PAWRP1-201ENST00000451083 565 ntBASIC14.91□□□□□ -0.02
CDH11P55287 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH11P55287 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH11P55287 AC091167.2-201ENST00000579581 588 ntBASIC14.91□□□□□ -0.02
CDH11P55287 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH11P55287 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH11P55287 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH11P55287 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH11P55287 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH11P55287 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH11P55287 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH11P55287 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH11P55287 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms