Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HMGA2P52926 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
HMGA2P52926 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGA2P52926 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HMGA2P52926 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.78□□□□□ -0.04
HMGA2P52926 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.78□□□□□ -0.04
HMGA2P52926 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 TCAF2P1-201ENST00000291129 2421 ntBASIC14.78□□□□□ -0.04
HMGA2P52926 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
HMGA2P52926 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
HMGA2P52926 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 AC134407.2-201ENST00000625089 1978 ntBASIC14.78□□□□□ -0.04
HMGA2P52926 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HMGA2P52926 LINC01101-201ENST00000622953 1884 ntBASIC14.78□□□□□ -0.04
HMGA2P52926 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGA2P52926 AC092127.1-201ENST00000567093 3455 ntBASIC14.78□□□□□ -0.04
HMGA2P52926 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.77□□□□□ -0.04
HMGA2P52926 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.04
HMGA2P52926 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.77□□□□□ -0.04
HMGA2P52926 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HMGA2P52926 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.77□□□□□ -0.04
HMGA2P52926 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HMGA2P52926 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGA2P52926 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.77□□□□□ -0.05
HMGA2P52926 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.77□□□□□ -0.05
HMGA2P52926 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.77□□□□□ -0.05
HMGA2P52926 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.77□□□□□ -0.05
HMGA2P52926 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGA2P52926 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.77□□□□□ -0.05
HMGA2P52926 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGA2P52926 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.77□□□□□ -0.05
HMGA2P52926 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGA2P52926 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGA2P52926 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HMGA2P52926 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGA2P52926 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HMGA2P52926 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HMGA2P52926 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HMGA2P52926 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HMGA2P52926 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.76□□□□□ -0.05
HMGA2P52926 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HMGA2P52926 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HMGA2P52926 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 RHOQP3-201ENST00000437982 621 ntBASIC14.76□□□□□ -0.05
HMGA2P52926 VN2R19P-201ENST00000442399 1052 ntBASIC14.76□□□□□ -0.05
HMGA2P52926 FAM197Y8-203ENST00000450145 560 ntBASIC14.76□□□□□ -0.05
HMGA2P52926 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.76□□□□□ -0.05
HMGA2P52926 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGA2P52926 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.76□□□□□ -0.05
HMGA2P52926 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGA2P52926 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.76□□□□□ -0.05
HMGA2P52926 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.76□□□□□ -0.05
HMGA2P52926 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms