Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.3■□□□□ 0.84
COL15A1P39059 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL15A1P39059 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
COL15A1P39059 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL15A1P39059 AC099336.1-201ENST00000417053 1171 ntBASIC20.3■□□□□ 0.84
COL15A1P39059 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.3■□□□□ 0.84
COL15A1P39059 TDH-203ENST00000531764 1110 ntBASIC20.3■□□□□ 0.84
COL15A1P39059 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.3■□□□□ 0.84
COL15A1P39059 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
COL15A1P39059 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.3■□□□□ 0.84
COL15A1P39059 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.3■□□□□ 0.84
COL15A1P39059 AL359711.2-201ENST00000563105 872 ntBASIC20.3■□□□□ 0.84
COL15A1P39059 AC133539.2-201ENST00000604757 467 ntBASIC20.3■□□□□ 0.84
COL15A1P39059 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.3■□□□□ 0.84
COL15A1P39059 PRORSD1P-202ENST00000563365 2154 ntBASIC20.3■□□□□ 0.84
COL15A1P39059 AC099398.1-201ENST00000567919 2776 ntBASIC20.3■□□□□ 0.84
COL15A1P39059 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL15A1P39059 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.29■□□□□ 0.84
COL15A1P39059 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL15A1P39059 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.29■□□□□ 0.84
COL15A1P39059 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.29■□□□□ 0.84
COL15A1P39059 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL15A1P39059 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL15A1P39059 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL15A1P39059 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.29■□□□□ 0.84
COL15A1P39059 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL15A1P39059 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.29■□□□□ 0.84
COL15A1P39059 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.29■□□□□ 0.84
COL15A1P39059 ACTG1P3-201ENST00000431775 1114 ntBASIC20.29■□□□□ 0.84
COL15A1P39059 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COL15A1P39059 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.29■□□□□ 0.84
COL15A1P39059 TARDBPP1-201ENST00000442013 1203 ntBASIC20.29■□□□□ 0.84
COL15A1P39059 KLF2P4-201ENST00000451959 1225 ntBASIC20.29■□□□□ 0.84
COL15A1P39059 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL15A1P39059 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
COL15A1P39059 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.29■□□□□ 0.84
COL15A1P39059 FAM86LP-201ENST00000478302 853 ntBASIC20.29■□□□□ 0.84
COL15A1P39059 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.29■□□□□ 0.84
COL15A1P39059 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.29■□□□□ 0.84
COL15A1P39059 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COL15A1P39059 AC243562.2-201ENST00000561247 970 ntBASIC20.29■□□□□ 0.84
COL15A1P39059 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.29■□□□□ 0.84
COL15A1P39059 AC124283.3-201ENST00000570869 594 ntBASIC20.29■□□□□ 0.84
COL15A1P39059 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.29■□□□□ 0.84
COL15A1P39059 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.29■□□□□ 0.84
COL15A1P39059 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.29■□□□□ 0.84
COL15A1P39059 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL15A1P39059 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL15A1P39059 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.28■□□□□ 0.84
COL15A1P39059 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.28■□□□□ 0.84
COL15A1P39059 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
COL15A1P39059 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
COL15A1P39059 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.28■□□□□ 0.84
COL15A1P39059 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COL15A1P39059 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
COL15A1P39059 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 MIR1908-201ENST00000410394 80 ntBASIC20.28■□□□□ 0.84
COL15A1P39059 ACTBP11-201ENST00000436287 1126 ntBASIC20.28■□□□□ 0.84
COL15A1P39059 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.28■□□□□ 0.84
COL15A1P39059 AL583810.1-201ENST00000553344 1045 ntBASIC20.28■□□□□ 0.84
COL15A1P39059 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.28■□□□□ 0.84
COL15A1P39059 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.28■□□□□ 0.84
COL15A1P39059 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.28■□□□□ 0.84
COL15A1P39059 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL15A1P39059 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.27■□□□□ 0.84
COL15A1P39059 INTS4P2-202ENST00000614726 2019 ntBASIC20.27■□□□□ 0.84
COL15A1P39059 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL15A1P39059 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL15A1P39059 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.27■□□□□ 0.84
COL15A1P39059 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.27■□□□□ 0.84
COL15A1P39059 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL15A1P39059 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.27■□□□□ 0.84
COL15A1P39059 FAM8A2P-201ENST00000528813 1142 ntBASIC20.27■□□□□ 0.84
COL15A1P39059 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.27■□□□□ 0.84
COL15A1P39059 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms