Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
MMP11P24347 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.4■□□□□ 0.06
MMP11P24347 AC003101.2-201ENST00000612557 442 ntBASIC15.4■□□□□ 0.06
MMP11P24347 AC007967.4-201ENST00000614700 386 ntBASIC15.4■□□□□ 0.06
MMP11P24347 AL390754.1-201ENST00000619088 582 ntBASIC15.4■□□□□ 0.06
MMP11P24347 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MMP11P24347 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP11P24347 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
MMP11P24347 AL365203.3-201ENST00000609742 2057 ntBASIC15.4■□□□□ 0.06
MMP11P24347 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
MMP11P24347 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.39■□□□□ 0.05
MMP11P24347 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.39■□□□□ 0.05
MMP11P24347 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.39■□□□□ 0.05
MMP11P24347 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.39■□□□□ 0.05
MMP11P24347 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP11P24347 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP11P24347 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP11P24347 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.39■□□□□ 0.05
MMP11P24347 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP11P24347 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MMP11P24347 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP11P24347 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
MMP11P24347 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
MMP11P24347 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.39■□□□□ 0.05
MMP11P24347 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MMP11P24347 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
MMP11P24347 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP11P24347 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP11P24347 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP11P24347 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MMP11P24347 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP11P24347 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
MMP11P24347 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP11P24347 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 AL512638.1-201ENST00000457493 794 ntBASIC15.38■□□□□ 0.05
MMP11P24347 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.38■□□□□ 0.05
MMP11P24347 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.38■□□□□ 0.05
MMP11P24347 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 AC020765.3-201ENST00000613051 740 ntBASIC15.38■□□□□ 0.05
MMP11P24347 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP11P24347 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP11P24347 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms