Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFTRP13569 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CFTRP13569 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC27.1■■□□□ 1.93
CFTRP13569 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFTRP13569 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC27.09■■□□□ 1.93
CFTRP13569 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFTRP13569 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC27.09■■□□□ 1.93
CFTRP13569 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC27.09■■□□□ 1.93
CFTRP13569 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC27.09■■□□□ 1.93
CFTRP13569 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC27.09■■□□□ 1.93
CFTRP13569 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC27.09■■□□□ 1.93
CFTRP13569 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC27.09■■□□□ 1.93
CFTRP13569 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC27.09■■□□□ 1.93
CFTRP13569 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC27.09■■□□□ 1.93
CFTRP13569 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC27.09■■□□□ 1.93
CFTRP13569 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFTRP13569 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFTRP13569 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFTRP13569 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CFTRP13569 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CFTRP13569 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CFTRP13569 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC27.08■■□□□ 1.93
CFTRP13569 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CFTRP13569 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC27.08■■□□□ 1.93
CFTRP13569 AC079178.1-201ENST00000420915 656 ntBASIC27.08■■□□□ 1.93
CFTRP13569 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC27.08■■□□□ 1.93
CFTRP13569 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
CFTRP13569 AC138649.2-201ENST00000615886 705 ntBASIC27.08■■□□□ 1.93
CFTRP13569 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CFTRP13569 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC27.08■■□□□ 1.93
CFTRP13569 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 RAC2-202ENST00000401529 569 ntTSL 4 BASIC27.07■■□□□ 1.92
CFTRP13569 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC27.07■■□□□ 1.92
CFTRP13569 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC27.07■■□□□ 1.92
CFTRP13569 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC27.07■■□□□ 1.92
CFTRP13569 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC27.07■■□□□ 1.92
CFTRP13569 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC27.07■■□□□ 1.92
CFTRP13569 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC27.07■■□□□ 1.92
CFTRP13569 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 AMT-233ENST00000636522 1620 ntTSL 2 BASIC27.07■■□□□ 1.92
CFTRP13569 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CFTRP13569 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC27.06■■□□□ 1.92
CFTRP13569 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC27.06■■□□□ 1.92
CFTRP13569 CYP46A4P-201ENST00000414953 267 ntBASIC27.06■■□□□ 1.92
CFTRP13569 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC27.06■■□□□ 1.92
CFTRP13569 SPTLC1P5-201ENST00000450718 252 ntBASIC27.06■■□□□ 1.92
CFTRP13569 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC27.06■■□□□ 1.92
CFTRP13569 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC27.06■■□□□ 1.92
CFTRP13569 KLK3-207ENST00000595952 969 ntTSL 3 BASIC27.06■■□□□ 1.92
CFTRP13569 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC27.06■■□□□ 1.92
CFTRP13569 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
CFTRP13569 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC27.06■■□□□ 1.92
CFTRP13569 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC27.06■■□□□ 1.92
CFTRP13569 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC27.06■■□□□ 1.92
CFTRP13569 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 IGF1-203ENST00000392904 761 ntTSL 5 BASIC27.06■■□□□ 1.92
CFTRP13569 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC27.06■■□□□ 1.92
CFTRP13569 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC27.06■■□□□ 1.92
CFTRP13569 RN7SL720P-201ENST00000488178 304 ntBASIC27.06■■□□□ 1.92
CFTRP13569 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
CFTRP13569 AC044849.1-201ENST00000519737 1188 ntBASIC27.06■■□□□ 1.92
CFTRP13569 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC27.06■■□□□ 1.92
CFTRP13569 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CFTRP13569 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFTRP13569 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFTRP13569 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC27.05■■□□□ 1.92
CFTRP13569 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFTRP13569 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFTRP13569 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC27.05■■□□□ 1.92
CFTRP13569 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFTRP13569 AC120498.9-201ENST00000339021 3867 ntBASIC27.05■■□□□ 1.92
CFTRP13569 POLL-217ENST00000628479 1953 ntTSL 5 BASIC27.05■■□□□ 1.92
CFTRP13569 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC27.05■■□□□ 1.92
CFTRP13569 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CFTRP13569 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
CFTRP13569 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CFTRP13569 SMS-201ENST00000379404 1174 ntTSL 3 BASIC27.05■■□□□ 1.92
CFTRP13569 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC27.05■■□□□ 1.92
CFTRP13569 FTLP10-202ENST00000505798 471 ntBASIC27.05■■□□□ 1.92
CFTRP13569 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
CFTRP13569 RN7SL574P-201ENST00000581512 297 ntBASIC27.05■■□□□ 1.92
CFTRP13569 MIR5572-201ENST00000583188 137 ntBASIC27.05■■□□□ 1.92
CFTRP13569 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC27.05■■□□□ 1.92
CFTRP13569 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC27.05■■□□□ 1.92
CFTRP13569 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms