Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.51□□□□□ -0.25
CTSDP07339 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.51□□□□□ -0.25
CTSDP07339 AC106795.1-205ENST00000512851 1056 ntBASIC13.51□□□□□ -0.25
CTSDP07339 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.51□□□□□ -0.25
CTSDP07339 AC012615.1-201ENST00000565797 1299 ntBASIC13.51□□□□□ -0.25
CTSDP07339 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 AC069148.1-201ENST00000608741 768 ntBASIC13.51□□□□□ -0.25
CTSDP07339 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.51□□□□□ -0.25
CTSDP07339 CICP13-201ENST00000422015 2789 ntBASIC13.51□□□□□ -0.25
CTSDP07339 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CTSDP07339 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CTSDP07339 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.51□□□□□ -0.25
CTSDP07339 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.5□□□□□ -0.25
CTSDP07339 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CTSDP07339 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.5□□□□□ -0.25
CTSDP07339 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.5□□□□□ -0.25
CTSDP07339 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.5□□□□□ -0.25
CTSDP07339 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.5□□□□□ -0.25
CTSDP07339 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 AC129492.6-201ENST00000611383 1305 ntBASIC13.5□□□□□ -0.25
CTSDP07339 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 AP000867.3-201ENST00000524675 377 ntBASIC13.5□□□□□ -0.25
CTSDP07339 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.5□□□□□ -0.25
CTSDP07339 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.5□□□□□ -0.25
CTSDP07339 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.5□□□□□ -0.25
CTSDP07339 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.5□□□□□ -0.25
CTSDP07339 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.5□□□□□ -0.25
CTSDP07339 AC093458.2-201ENST00000623150 629 ntBASIC13.5□□□□□ -0.25
CTSDP07339 AL805961.1-202ENST00000641562 540 ntBASIC13.5□□□□□ -0.25
CTSDP07339 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
CTSDP07339 AC011477.6-201ENST00000604980 1927 ntBASIC13.5□□□□□ -0.25
CTSDP07339 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.5□□□□□ -0.25
CTSDP07339 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.5□□□□□ -0.25
CTSDP07339 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 MIR600HG-201ENST00000449175 5984 ntBASIC13.5□□□□□ -0.25
CTSDP07339 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.5□□□□□ -0.25
CTSDP07339 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.5□□□□□ -0.25
CTSDP07339 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.5□□□□□ -0.25
CTSDP07339 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CTSDP07339 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.49□□□□□ -0.25
CTSDP07339 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 LINC01101-201ENST00000622953 1884 ntBASIC13.49□□□□□ -0.25
CTSDP07339 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CTSDP07339 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CTSDP07339 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms