Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A1P02452 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A1P02452 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.24■□□□□ 0.67
COL1A1P02452 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL1A1P02452 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
COL1A1P02452 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A1P02452 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A1P02452 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A1P02452 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A1P02452 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.23■□□□□ 0.67
COL1A1P02452 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.23■□□□□ 0.67
COL1A1P02452 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 AL450472.2-201ENST00000603663 1156 ntBASIC19.23■□□□□ 0.67
COL1A1P02452 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL1A1P02452 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.23■□□□□ 0.67
COL1A1P02452 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A1P02452 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL1A1P02452 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A1P02452 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.22■□□□□ 0.67
COL1A1P02452 AC092552.1-201ENST00000547243 906 ntBASIC19.22■□□□□ 0.67
COL1A1P02452 AC036164.1-201ENST00000570544 333 ntBASIC19.22■□□□□ 0.67
COL1A1P02452 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.22■□□□□ 0.67
COL1A1P02452 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.22■□□□□ 0.67
COL1A1P02452 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL1A1P02452 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL1A1P02452 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.22■□□□□ 0.67
COL1A1P02452 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.22■□□□□ 0.67
COL1A1P02452 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 ANKRD19P-201ENST00000338192 862 ntBASIC19.22■□□□□ 0.67
COL1A1P02452 MIR648-201ENST00000385046 94 ntBASIC19.22■□□□□ 0.67
COL1A1P02452 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.22■□□□□ 0.67
COL1A1P02452 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.22■□□□□ 0.67
COL1A1P02452 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL1A1P02452 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.22■□□□□ 0.67
COL1A1P02452 PHKG1P2-201ENST00000457537 863 ntBASIC19.22■□□□□ 0.67
COL1A1P02452 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms