Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 MIR769-201ENST00000390225 118 ntBASIC23.81■■□□□ 1.4
RAPGEF3O95398 MPV17-205ENST00000402310 906 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 AC069218.1-201ENST00000435269 762 ntBASIC23.81■■□□□ 1.4
RAPGEF3O95398 CNN2P10-201ENST00000443067 918 ntBASIC23.81■■□□□ 1.4
RAPGEF3O95398 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 AC015910.1-201ENST00000579400 975 ntBASIC23.81■■□□□ 1.4
RAPGEF3O95398 RN7SL574P-201ENST00000581512 297 ntBASIC23.81■■□□□ 1.4
RAPGEF3O95398 RN7SL555P-201ENST00000584742 339 ntBASIC23.81■■□□□ 1.4
RAPGEF3O95398 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 ECM1P1-201ENST00000604092 1279 ntBASIC23.81■■□□□ 1.4
RAPGEF3O95398 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 VILL-207ENST00000465644 1857 ntTSL 5 BASIC23.81■■□□□ 1.4
RAPGEF3O95398 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF3O95398 ZBTB45P2-201ENST00000452245 1531 ntBASIC23.8■■□□□ 1.4
RAPGEF3O95398 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 CD8B2-202ENST00000417670 633 ntBASIC23.8■■□□□ 1.4
RAPGEF3O95398 AC136604.1-201ENST00000418535 575 ntBASIC23.8■■□□□ 1.4
RAPGEF3O95398 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 AL023775.1-201ENST00000454907 1746 ntBASIC23.8■■□□□ 1.4
RAPGEF3O95398 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC23.8■■□□□ 1.4
RAPGEF3O95398 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC23.8■■□□□ 1.4
RAPGEF3O95398 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
RAPGEF3O95398 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC23.8■■□□□ 1.4
RAPGEF3O95398 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RAPGEF3O95398 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RAPGEF3O95398 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAPGEF3O95398 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RAPGEF3O95398 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 KRT18P43-201ENST00000469825 1281 ntBASIC23.79■■□□□ 1.4
RAPGEF3O95398 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 AC138649.2-201ENST00000615886 705 ntBASIC23.79■■□□□ 1.4
RAPGEF3O95398 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAPGEF3O95398 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC23.79■■□□□ 1.4
RAPGEF3O95398 GGT3P-204ENST00000453783 1664 ntBASIC23.79■■□□□ 1.4
RAPGEF3O95398 KRT8P35-201ENST00000483942 1338 ntBASIC23.79■■□□□ 1.4
RAPGEF3O95398 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 FOS-202ENST00000535987 1402 ntTSL 2 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 EEF1DP6-201ENST00000449232 372 ntBASIC23.78■■□□□ 1.4
RAPGEF3O95398 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 MIR4750-201ENST00000584564 56 ntBASIC23.78■■□□□ 1.4
RAPGEF3O95398 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAPGEF3O95398 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC23.78■■□□□ 1.4
RAPGEF3O95398 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms