Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CLSTN1O94985 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
CLSTN1O94985 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.03■□□□□ 0.48
CLSTN1O94985 HLA-A-202ENST00000376806 1854 ntBASIC18.03■□□□□ 0.48
CLSTN1O94985 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.03■□□□□ 0.48
CLSTN1O94985 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.03■□□□□ 0.48
CLSTN1O94985 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLSTN1O94985 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.02■□□□□ 0.48
CLSTN1O94985 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.02■□□□□ 0.48
CLSTN1O94985 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.02■□□□□ 0.48
CLSTN1O94985 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC18.02■□□□□ 0.48
CLSTN1O94985 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.02■□□□□ 0.48
CLSTN1O94985 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLSTN1O94985 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLSTN1O94985 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.02■□□□□ 0.48
CLSTN1O94985 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLSTN1O94985 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.02■□□□□ 0.48
CLSTN1O94985 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.02■□□□□ 0.48
CLSTN1O94985 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.02■□□□□ 0.48
CLSTN1O94985 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.02■□□□□ 0.48
CLSTN1O94985 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.02■□□□□ 0.48
CLSTN1O94985 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.02■□□□□ 0.48
CLSTN1O94985 AL078644.1-201ENST00000609881 752 ntBASIC18.02■□□□□ 0.48
CLSTN1O94985 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.02■□□□□ 0.48
CLSTN1O94985 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.02■□□□□ 0.48
CLSTN1O94985 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLSTN1O94985 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLSTN1O94985 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLSTN1O94985 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLSTN1O94985 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLSTN1O94985 AL662844.4-201ENST00000606367 2838 ntBASIC18.02■□□□□ 0.47
CLSTN1O94985 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLSTN1O94985 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.02■□□□□ 0.47
CLSTN1O94985 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLSTN1O94985 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLSTN1O94985 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.01■□□□□ 0.47
CLSTN1O94985 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CLSTN1O94985 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.01■□□□□ 0.47
CLSTN1O94985 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.01■□□□□ 0.47
CLSTN1O94985 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.01■□□□□ 0.47
CLSTN1O94985 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.01■□□□□ 0.47
CLSTN1O94985 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC18.01■□□□□ 0.47
CLSTN1O94985 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLSTN1O94985 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLSTN1O94985 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.01■□□□□ 0.47
CLSTN1O94985 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.01■□□□□ 0.47
CLSTN1O94985 HMGA1P7-201ENST00000406908 502 ntBASIC18.01■□□□□ 0.47
CLSTN1O94985 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 AC074386.1-202ENST00000463561 864 ntBASIC18.01■□□□□ 0.47
CLSTN1O94985 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CLSTN1O94985 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.01■□□□□ 0.47
CLSTN1O94985 PDPK2P-202ENST00000562415 1191 ntBASIC18.01■□□□□ 0.47
CLSTN1O94985 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.01■□□□□ 0.47
CLSTN1O94985 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.01■□□□□ 0.47
CLSTN1O94985 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 AC092919.2-201ENST00000623631 1645 ntBASIC18.01■□□□□ 0.47
CLSTN1O94985 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.01■□□□□ 0.47
CLSTN1O94985 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.01■□□□□ 0.47
CLSTN1O94985 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLSTN1O94985 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLSTN1O94985 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms