Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 FAM58DP-201ENST00000428076 619 ntBASIC15.68■□□□□ 0.1
SLC28A2O43868 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC28A2O43868 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC28A2O43868 AC069120.2-201ENST00000524091 540 ntBASIC15.68■□□□□ 0.1
SLC28A2O43868 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 AC009118.2-201ENST00000613275 655 ntBASIC15.68■□□□□ 0.1
SLC28A2O43868 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC28A2O43868 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC28A2O43868 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC28A2O43868 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC28A2O43868 AC026691.1-201ENST00000602502 2017 ntBASIC15.68■□□□□ 0.1
SLC28A2O43868 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC28A2O43868 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC28A2O43868 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SLC28A2O43868 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SLC28A2O43868 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC28A2O43868 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC28A2O43868 SPDYE7P-202ENST00000420373 878 ntBASIC15.67■□□□□ 0.1
SLC28A2O43868 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC28A2O43868 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A2O43868 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC28A2O43868 HILS1-202ENST00000545329 423 ntBASIC15.67■□□□□ 0.1
SLC28A2O43868 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC28A2O43868 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC28A2O43868 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC28A2O43868 AL139011.1-202ENST00000642063 584 ntBASIC15.67■□□□□ 0.1
SLC28A2O43868 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC28A2O43868 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC28A2O43868 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC28A2O43868 AL391005.1-201ENST00000623953 2435 ntBASIC15.67■□□□□ 0.1
SLC28A2O43868 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SLC28A2O43868 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC28A2O43868 AL162727.3-201ENST00000635661 2787 ntBASIC15.67■□□□□ 0.1
SLC28A2O43868 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC28A2O43868 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC28A2O43868 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
SLC28A2O43868 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC28A2O43868 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC28A2O43868 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC28A2O43868 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC28A2O43868 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC28A2O43868 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 AC005052.1-201ENST00000625181 2492 ntBASIC15.66■□□□□ 0.1
SLC28A2O43868 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC28A2O43868 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC28A2O43868 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms